Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110530778 |
| gene name | LOC106590523 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 82664195 ~ 82665021 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| eukaryotic translation initiation factor 5A-1-like isoform X1 |
| id | name | namespace |
|---|---|---|
| GO:0006413 | translational initiation | biological_process |
| GO:0006452 | translational frameshifting | biological_process |
| GO:0045901 | positive regulation of translational elongation | biological_process |
| GO:0045905 | positive regulation of translational termination | biological_process |
| GO:0008612 | peptidyl-lysine modification to peptidyl-hypusine | biological_process |
| GO:0043022 | ribosome binding | molecular_function |
| GO:0003743 | translation initiation factor activity | molecular_function |
| GO:0003746 | translation elongation factor activity | molecular_function |
| id | description |
|---|---|
| K03263 | EIF5A; translation initiation factor 5A |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021614040.2 | True | 827 | mRNA | 0.50 | 1 | 82664195 | 82665021 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530773 | LOC106569595 | coding | upstream | 129055 | 82525950 ~ 82535140 (+) |
| scp2a | scp2 | coding | upstream | 279337 | 82362119 ~ 82384858 (+) |
| czib | cssa14h1orf123 | coding | upstream | 302294 | 82359203 ~ 82361901 (+) |
| uck2b | LOC106569706 | coding | upstream | 305909 | 82341217 ~ 82358286 (+) |
| LOC110530769 | LOC106569594 | coding | upstream | 343429 | 82313294 ~ 82320766 (+) |
| LOC110530781 | sppl2b | coding | downstream | 63461 | 82728482 ~ 82758005 (+) |
| trnaa-ugc-28 | NA | coding | downstream | 197090 | 82862111 ~ 82862184 (+) |
| LOC110530786 | LOC106569613 | coding | downstream | 510713 | 83175734 ~ 83204194 (+) |
| LOC118965639 | NA | coding | downstream | 534318 | 83199339 ~ 83204020 (+) |
| LOC110530792 | NA | coding | downstream | 566254 | 83231275 ~ 83281525 (+) |
| G753739 | NA | non-coding | upstream | 49614 | 82614363 ~ 82614581 (+) |
| G753731 | NA | non-coding | upstream | 58368 | 82601889 ~ 82605827 (+) |
| G753714 | LOC106569597 | non-coding | upstream | 88252 | 82571240 ~ 82575943 (+) |
| G753693 | NA | non-coding | upstream | 121772 | 82541609 ~ 82542423 (+) |
| G753684 | NA | non-coding | upstream | 154593 | 82509266 ~ 82509602 (+) |
| G753778 | NA | non-coding | downstream | 33835 | 82698856 ~ 82699122 (+) |
| G753798 | NA | non-coding | downstream | 59886 | 82724907 ~ 82725235 (+) |
| G753799 | NA | non-coding | downstream | 62104 | 82727125 ~ 82727929 (+) |
| G753805 | NA | non-coding | downstream | 75948 | 82740969 ~ 82741451 (+) |
| G753823 | NA | non-coding | downstream | 118410 | 82783431 ~ 82783725 (+) |
| G753337 | NA | other | upstream | 738036 | 81922162 ~ 81931491 (+) |
| sdhc | LOC106569582 | other | upstream | 861910 | 81783282 ~ 81802285 (+) |
| G753205 | LOC106569572 | other | upstream | 1176585 | 81486820 ~ 81487610 (+) |
| G752398 | NA | other | upstream | 1922250 | 80741604 ~ 80741945 (+) |
| G752357 | NA | other | upstream | 2030143 | 80631310 ~ 80634052 (+) |
| G754927 | NA | other | downstream | 590718 | 83255739 ~ 83257866 (+) |
| G755286 | NA | other | downstream | 964351 | 83629372 ~ 83629738 (+) |
| G755277 | NA | other | downstream | 988024 | 83653045 ~ 83654438 (+) |
| G755298 | NA | other | downstream | 993076 | 83658097 ~ 83660046 (+) |
| LOC110529145 | LOC106569623 | other | downstream | 1120939 | 83785960 ~ 83788580 (+) |
