LOC118965567


Basic Information

Item Value
gene id LOC118965567
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 84496434 ~ 84497690 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036986586.1
gagagaggcagagagtttACACAGAGTGGCTATGAGATCAGATGGGAGGCAGATAGAGATGGCGTGAAACAGATGTGGTGATGattgtgggtgggggggggggagatacacacactaacacaacgtCCACAtcgacacatgcacacacataccagCTCCACTCAATCATCTCCATCTCGGTCCAAACCACATAATATCTCCGGCTGAGCCAGTCGCTGAATTACCATTAATGGGACATTAGGAGACAAGCTGCAGGAAGCTGGGGAAGACGAGCTGCAGGAAGCTGGGGAAGACGAGACGCAGGAAGCTGGGGAAGACGAGACGCAGGAAGCTGGGGAAGACGAGACGCAGGAAGCTGGGGAAGACGAGACGCAGGAAGCTGGGGAAGACGAGACGCAGGAAGCTGGGGAAGACAAGCTGATAGGAAGCTGGGGAAGACGAGATGCAGGAAGCTGGGGAAGACAAGCTGCAGGAAGCTGGGGAAGACAAGATGCAGGAAGCTGGGGAAGACGAGCTGCAGGAAGCTGGGGAAGACGAGACGCAGGAAGCTGGGGAAGACGAGACGCAGGAAGCTGGGGAAGACGAGACGCAGGAAGCTGGGGAAGACGAGACGCAGGAAGCTGGGGAAGACGAGACGCAGGAAGCTGGGGAAGACGAGCTGCAGGAAGCTGGGGAAGACGAGACGCAGGAAGCTGGGGAAGACGAGACGCAGGAAGCTGGGGAAGACGAGCTGCAGGAAGCTGGGGAAGACGAGCTGCAGGAAGCTGGGGAAGACAAGCTGCAGGAAGCTGGGGAAGACGAGACGCAGGAAGCTGGGGAAGACGAGACGCAGGAAGCTGGGGAAGACGAGACGCAGGAAGCTGGGGAAGACGAGCTGCAGGAAGCTGGGGAAGACGAGCTGCAGGAAGCTGGGGAAGACAAGCTGCAGGAAGCTGGGGAAGACAAGCTGATAGGAAGCTGGGGAAGACGAGATGCAGGAAGCTGGGGAAGACAAGCTGCAGGAAGCTGGGGAAGACAAGATGCAGGAAGCTGGGGAAGACACCAACAGGTACTTCACAGTATTTCTATTTAATTTTTTCTAACACATTTGATAAACAGGTGCAAGatagaaattggcctataacagttaggatcagcttgatctccccctgtAAATTAAGGATgcactgtggctgccttccaagcaccTGGAACCTTCCCAGAAATGAGATGGGCTGCAAACTTATAGAAGATTAGAATCTAAAACATCTGACCCAG

Function

NR:

description
PREDICTED: ice nucleation protein InaA-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036986586.1 True 1257 mRNA 0.55 1 84496434 84497690

Neighbor

gene id symbol gene type direction distance location
LOC118965621 NA coding downstream 458098 84036777 ~ 84038336 (-)
LOC118965640 NA coding downstream 491905 84003317 ~ 84004529 (-)
cdcp2 cdcp2 coding downstream 537651 83954240 ~ 83958783 (-)
tmem59 tmem59 coding downstream 545644 83934563 ~ 83960923 (-)
LOC110530817 ldlrad1 coding downstream 570517 83922742 ~ 83925917 (-)
gorasp1a LOC106569800 coding upstream 649218 85146908 ~ 85156401 (-)
LOC110530840 LOC106569802 coding upstream 666095 85163785 ~ 85201362 (-)
LOC118965570 LOC106569806 coding upstream 750660 85248350 ~ 85267794 (-)
LOC118965571 LOC106569806 coding upstream 777051 85274741 ~ 85294926 (-)
slc22a13a LOC106569806 coding upstream 803343 85301033 ~ 85323453 (-)
G756626 NA non-coding downstream 31154 84464884 ~ 84465280 (-)
G756008 NA non-coding downstream 113038 84382835 ~ 84383396 (-)
G756007 NA non-coding downstream 113610 84382535 ~ 84382824 (-)
G756003 NA non-coding downstream 116454 84379742 ~ 84379980 (-)
G755984 NA non-coding downstream 145562 84350649 ~ 84350872 (-)
G756662 NA non-coding upstream 19179 84516869 ~ 84575842 (-)
G756681 NA non-coding upstream 53697 84551387 ~ 84553157 (-)
G756683 NA non-coding upstream 61091 84558781 ~ 84562123 (-)
G756677 NA non-coding upstream 70184 84567874 ~ 84568305 (-)
G756715 NA non-coding upstream 124463 84622153 ~ 84622543 (-)
G756592 NA other downstream 80634 84414487 ~ 84415800 (-)
G755959 NA other downstream 198899 84297165 ~ 84297535 (-)
ccl25a ccl21 other downstream 697251 83721046 ~ 83799203 (-)
G755142 NA other downstream 1115461 83378942 ~ 83380973 (-)
G754333 NA other downstream 2524345 81970600 ~ 81972089 (-)
G756727 NA other upstream 149774 84647464 ~ 84648224 (-)
G757086 NA other upstream 904928 85402618 ~ 85404005 (-)
G756981 NA other upstream 915741 85413431 ~ 85414702 (-)
G757292 LOC106569817 other upstream 1205440 85703130 ~ 85756434 (-)
G757422 NA other upstream 1365321 85863011 ~ 85863887 (-)

Expression


Co-expression Network