LOC118965570 (LOC106569806)


Basic Information

Item Value
gene id LOC118965570
gene name LOC106569806
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 85248350 ~ 85267794 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036986601.1
CATTTTGAATGATGTCCTTTACTTCTGGTCTTCTGTCACTCTGTAAAAATGCAACCAAACATCAAAAAGTTTTTTCAGAGGAACATTAAACAGACCTTCAAAAGGAGGTCATAAACAGTTTTAACCAACACGGTTTTCTCCCCTTTTCTCTTCCAGATTTGGTCGCCAACGAGCAACTCAAATACCCATGGTTATTATGCTCATTTTTACTGTAACGACAGGCTTGTCTCCAAACTTTTATTTGTATATGGCATCCCAGTTTTTAGTAGGGATCGCATATGGTGGATTTCGAATCAACTGCATTGTATTAGCAACTGAATGGGTCGGAGTGACAAAACGTTCCTATGCGTCTTGTTTGAGTCAGACGTTCAGTGGAGTTGGCCAGTGCATCCTTGCTGGCATGATCTTCTTCATCCGAGACTGGAGACTTGCCCAGTTTGTCATGGCTGTACCAATAGCAGTGGTCGCAGTGTACATATGGTTTATTCCTGAATCAGCCAGGTGGTTATTGGATCAGGGGAAAACAGAGGAAGCTAAGAAGTTGATACTCAGGGTAGCAGCCATCAACAAACGCACAGTTCCAGATACAATTCTAGAGAAGATAGCTGAGGAGAAAGTTGTTCAGAAGGGAGGCATACTCATTCTCATCAGATCTCCTGTACTTAGGAAATACTTCTTAACTATTACTCTTGCATGGTTCTCGTTAAACCTCTCCTACTACTGTCTGTCCTTTAACGTTGGAAACTTTGGCCTGGACATCTTCTTGACACTGCTCTTGTTCGGACTCACAGAGATACCAGGTCATATACTCTGCATCTTTATACTGGAATATTTGGGGAGGAAGATATCCTTAATGGCCACCCTTATGACTGGCGGATTCACATGCTTCCTAATCCTGGCTGTTCCACAAGACAACGCCGTTGCTATTACTGCTCTTGCTACTGCTGGGAGGTTTTTCATGAACAATGCTGGATCCGTATGTAACGTCTATGTTCAGGAGCTGTTTCCCACCTCTGTTAGACAAACGTCCACAGGCTTGGGCTCAATAGCGACCAGAATTGCTGGAATACTGTCACCAATGCTCAACATATTGGCCACATACCATTGGTCTATCCCCACGATCGTGTTCAGCAGCCTGTCATTGGTTGGTGGGGCTCTGGTCTTTCTGCTTCCTGAGACCAGGAGGACAGAACTACCTGACTCTACAGATGAGGCCGAGGGGAAGAGAAATGTGACTATCGCCATGAAGATAGACAAAGGCTGCAAAGTGGATGATTACGACTCTGAAAAATCTACCAAACTATAAAGTCATGTTTATGTAAGTCTTTTTTTCTGGGTAAATTTATTTTCAAGGCTTAGTTAGTAAGACAGTTGGCTGGTGCATGGTTGTTGTAACACCAAGGTTTTGAATTTGATTCCTGGATGGGCCACATAACTTGCTGTTTTTAACTTTGGCTTATAGAATTTGAAAAAATTACTTTACTCTTTTTGTAACTCTTATCACTAGCTAAATGGATCAGAAACATACGATAAAAGTGTCTACTAAAtgaacatattattattatatttgaaTTTAAATACATTCGCAGTGTATCAAGGAATCTAATGATATATACACCGTTACTCACATTTGTATACAAAAACAGACTATCACCTATGTTACCCAATGAATCTGTAAATATTGTTACGAAACCACCGAGTCAGCCTACTGCTAACTTTACTGTCGCAGTGTCCAGGAGTCCTATAGGTCTGGCTAAATAATATATATCCTGATTGAATGTGTGCATTTATGTGAGAAGTAAAAGTCTGCAGATCAGGTGTTGAATGCATGTTCCCCAGGAGATAGCTAACTCTGGATCCAGGGCCAGCTCCTGATTGACTTCTTGGTCGGCCTGCCCAAGTAGTTTAGTTGTTTTCACAATGGTTGgtgacaaaaaaataaacatattcaaaataaatgtaaaaaattggaGGGGGGACAAAACGAAGGATTTAACCAACCAAAAACGGGAAGTCCCGTCAGACCCAAGAGGCCACATTCAAGCCTCACTGAAGTGTCTGCCAGTCACTGATTGCCCAGAGCTGGTCATCTTATCATCAAGCGTTGGtatttcaatcagctgtgtaATGCCAAGGTAACAAATCAAAATGTGTACCCCTtttggtccccaggaccaggattgagaaacACTACACTAATCTACCCATTTATTATTGAACAAAATTGTTTCAGATAACTTTTTTAAATTTGCTACACGTCACATGAAATTGCCGTACTGTCTACTTGTCGGGTTGACAAGATTGTTTACAGGAAAtagcttcttcttttttttattttttataaacccGTAACTTTGTCATGTCATTTCTTACATTCAGCAGCTACCCAGATCATTAACTTCAATTTAAAACTAAACATGATTATATTCAGAGGTCCAAATCATCCTTGTTGTTCcacaataatgtttttttttcttctgactGAATAAAACCCAAAGGGCATTCCTACTGTACAATAAGCCAATCACATGGATGTGACTTTATGTCCCTTGATCTACACTTCTAAGAAGGCACCTGCCAAGAGATAAGTGAGGTTTATAGTATCTGTAAAGAATCATCAGTCGACTGCTAACAACATGTCATTACTCAGCCGTACTGTGGAGAACCCCATCACAGTCACTCTCTCTGGCCCCGGGACACTCTCACAAAACATCCTTGCTGGTA

Function

NR:

description
solute carrier family 22 member 13-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036986601.1 True 2724 mRNA 0.41 8 85248350 85267794

Neighbor

gene id symbol gene type direction distance location
LOC110530840 LOC106569802 coding downstream 46988 85163785 ~ 85201362 (-)
gorasp1a LOC106569800 coding downstream 91949 85146908 ~ 85156401 (-)
LOC118965567 NA coding downstream 750660 84496434 ~ 84497690 (-)
LOC118965621 NA coding downstream 1210014 84036777 ~ 84038336 (-)
LOC118965640 NA coding downstream 1243821 84003317 ~ 84004529 (-)
LOC118965571 LOC106569806 coding upstream 6947 85274741 ~ 85294926 (-)
slc22a13a LOC106569806 coding upstream 33239 85301033 ~ 85323453 (-)
LOC110530836 LOC106569807 coding upstream 64571 85332365 ~ 85350362 (-)
LOC118965576 NA coding upstream 148392 85416186 ~ 85417391 (-)
LOC110530834 ctdspl coding upstream 150470 85418264 ~ 85462122 (-)
G757025 NA non-coding downstream 29743 85218215 ~ 85218607 (-)
G757003 NA non-coding downstream 32292 85208399 ~ 85216058 (-)
G757016 NA non-coding downstream 44080 85204033 ~ 85204270 (-)
G757012 NA non-coding downstream 47612 85200498 ~ 85200738 (-)
G757007 LOC100194703 non-coding downstream 56548 85191485 ~ 85191802 (-)
G757037 NA non-coding upstream 2917 85270711 ~ 85298669 (-)
G757041 NA non-coding upstream 24874 85292668 ~ 85320599 (-)
G756979 NA non-coding upstream 61382 85329176 ~ 85332132 (-)
G757050 NA non-coding upstream 84357 85352151 ~ 85352570 (-)
G757053 NA non-coding upstream 87872 85355666 ~ 85355871 (-)
G756727 NA other downstream 600126 84647464 ~ 84648224 (-)
G756592 NA other downstream 832550 84414487 ~ 84415800 (-)
G755959 NA other downstream 950815 84297165 ~ 84297535 (-)
ccl25a ccl21 other downstream 1449167 83721046 ~ 83799203 (-)
G755142 NA other downstream 1867377 83378942 ~ 83380973 (-)
G757086 NA other upstream 134824 85402618 ~ 85404005 (-)
G756981 NA other upstream 145637 85413431 ~ 85414702 (-)
G757292 LOC106569817 other upstream 435336 85703130 ~ 85756434 (-)
G757422 NA other upstream 595217 85863011 ~ 85863887 (-)
G757788 NA other upstream 962580 86230374 ~ 86308150 (-)

Expression


Co-expression Network