LOC118965573


Basic Information

Item Value
gene id LOC118965573
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 85288779 ~ 85290009 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052984.1
aatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtacttcataCAGCACCTGCAGTGGTAAAGATCGTCATGTCTCTCTTTGGTGGGTGCATAAGTTTCACAAGAAGTAAGGTCCAGCTGAATAATGGAAAGAAGGCAGAAACCTGAACCAGGACGAGAGGTTCCACATCTGATGATCCTAGGGGACCAGAAGGACCTCTCCCAGTGATACCAGGAGATCTAGTCTACGTTCGAGTGTTCCGAAGGAAGTGGGATCAGCCGAGGAGAGAAGGACCCTACGAGGTGGCAATAGCCACAAACACGGCCGTCTAAGTGAAAGGAAGCAAGACGTGGTATCATCTAAACCACTGCACCCGAGTCCCGACGGAGAGAAGGACACAACCATACAGAGATGAGGACACAGAGGATGCTGATTCACCAGGCGGGACCCCGGAGGGAGCAGGAGCAGCGGAAACGATCAAAGCGCCGGGGAGGAATCAAGAAAATGGCAGACTAGATACAACGAGTGCATCAACTAAACGCACTCAGAAGAAGCACCAGGGGAAAAGAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052984.1 True 571 mRNA 0.51 2 85288779 85290009

Neighbor

gene id symbol gene type direction distance location
LOC118965572 NA coding upstream 25380 85256782 ~ 85264093 (+)
xirp1 LOC106569803 coding upstream 54333 85208608 ~ 85234446 (+)
LOC110530843 LOC106569799 coding upstream 144402 85124558 ~ 85144377 (+)
LOC110531035 LOC106569797 coding upstream 181262 85002397 ~ 85107517 (+)
capsla capsl coding upstream 310677 84973597 ~ 84978102 (+)
LOC118965574 NA coding downstream 25900 85315909 ~ 85317139 (+)
LOC110530835 LOC106569808 coding downstream 74724 85364733 ~ 85410339 (+)
LOC118965575 NA coding downstream 94896 85384905 ~ 85387277 (+)
hhatla hhatl coding downstream 174393 85464402 ~ 85505892 (+)
klhl40a klhl40 coding downstream 221373 85511382 ~ 85525239 (+)
G756428 NA non-coding upstream 40867 85247286 ~ 85247912 (+)
G756427 NA non-coding upstream 42189 85246304 ~ 85246590 (+)
G756426 NA non-coding upstream 45836 85242712 ~ 85242943 (+)
G756425 NA non-coding upstream 51484 85237072 ~ 85237295 (+)
G756420 NA non-coding upstream 80954 85207567 ~ 85207825 (+)
G756440 NA non-coding downstream 35112 85325121 ~ 85325333 (+)
G756441 NA non-coding downstream 35571 85325580 ~ 85326369 (+)
G756442 NA non-coding downstream 38284 85328293 ~ 85328617 (+)
G756448 NA non-coding downstream 64021 85354030 ~ 85354275 (+)
G756454 NA non-coding downstream 69895 85359904 ~ 85360207 (+)
G756298 NA other upstream 351035 84936066 ~ 84937744 (+)
G756271 NA other upstream 410700 84876994 ~ 84878079 (+)
G756134 NA other upstream 726888 84558786 ~ 84561891 (+)
G755602 NA other upstream 980505 84303470 ~ 84308274 (+)
G757472 NA other downstream 661959 85951968 ~ 86028274 (+)
G757663 NA other downstream 827654 86117663 ~ 86117948 (+)
G757754 NA other downstream 940342 86230351 ~ 86231459 (+)
G757902 NA other downstream 1241144 86531153 ~ 86532379 (+)
G758045 NA other downstream 1344775 86634784 ~ 86635460 (+)

Expression


Co-expression Network