LOC110530826 (LOC106569812)


Basic Information

Item Value
gene id LOC110530826
gene name LOC106569812
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 85739005 ~ 85760958 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021614109.2
TAGGAGGGGATAACGAAGTAATCCGTCACCATGAGTACGGACGCGGAGATGCAAATCTACGGCAAGGCTGCCTTGTACCTTCGTAAgcctgagagggagaggatggaggcacAAGCCGCACCTTTTGATTCAAAGAACGCCTGCTATGTGACAGATGTCAAGGAGCTGTACCTAAAGGGTTTGGTCACTGCCAGGGCCGATGGCAAGTGTACTGTGACAGTCACGAAACCTGATGGGACTAAGGAGGAAGGAAAAGAGTTCAAAGAAGCAGACATCTATCAGATGAACCCCCCTAAGTACGACAAGATTGAGGACATGGCCATGATGACCTACCTGAATGAAGCCTCTGTGTTGTATAACCTCAAAGAGCGTTATGCAGCATGGATGATCTATACCTACTCTGGGCTCTTCTGTGCCACGGTGAACCCCTACAAGTGGCTCCCTGTGTACGATGAAGAGGTTGTCAACGCCtacagagggaagaagaggatggAGGCTCCACCCCATATCTTCTCCGTCTCTGACAACGCCTTTCAGTTCATGATGATTGATAAGGAGAACCAGTCTGTCCTGATTACTGGAGAATCCGGTGCAGGAAAGACTGTCAACACCAAGCGTGTCATCCAGTACTTCGCCACCATTGCGGTATCTGGTGCCAAGAAGGAAGTAGACCCCAGCAAAATGCAGGGGTCTCTTGAGGATCAGATCATTGCAGCTAACCCTCTGCTGGAGTCTTACGGTAATGCCAAGACAGTGAGGAACGACAACTCGTCTCGCTTTGGTAAATTCATCAGGATTCACTTTCAAGCAGGCAAACTGGCTAAAGCTGATATTGAGACCTacctGCTGGAGAAGTCCAGAGTGTCCTTCCAGCTGCCCGATGAGAGAGGCTACCACATCTTCTACCAGATGATGACAGGCCACAAACCTGAGCTAGTTGAAATGACGCTCATCACTACCAACCCCTACGACTATCCCATGATCAGCCAGGGTCAGATCACTGTGGCCAGCATCAACGACAAGGAAGAGCTGGATGCCACGGATGATGCCATTACGATCCTGGGCTTCACTAATGATGAGAAGATGGCCATCTACAAGTTGACAGGTGCTGTAATGCATCATGGCAACTTGAAATTCAAGCAGAAGCAGCGTGAGGAGCAGGCCGAGCCAGAAGGCACAGAGGTGGCTGATAAAATCGGTTACCTGCTGGGCCTGAACTCAGCGGAGTTGCTGAAATGTTTGTGCTACCCCAGAGTGAAGGTCGGCAACGAGTATGTGACCAAGGGACAGACTGTGCCTCAGGTTTATAATGCAGTCATGGCTCTGGCCAAGTCCATCTATGAGAGGATGTTCTTGTGGATGGTCATCCGTATCAACGAGATGTTGGACACCAAGAATCCAAGGCAGTTCTATATCGGTGTGCTCGACATTGCCGGATTTGAGATCTTTGATTACAACAGTATGGAGCAACTGTGCATCAACTTCACCAATGAGAAACTGCAacagtttttcaaccacaccatgtTCGTCCTTGAGCAAGAGGAGTACAAGAAGGAGGGAATTGTCTGGGAATTCATTGACTTCGGCATGGACTTGGCTGCCTGCATTGAGCTTATTGAGAAGCCATTGGGCATCTTCTCCATCCTTGAAGAGGAGTGCATGTTCCCCAAGGCTTCAGACACTACCTTCAAGAACAAGTTGAACGACCAGCATCTTGGCAAAACCAAGGCATATGAGAAGCCCAAACCTGCCAAAGGCAAGGCAGAGGCCCACTTCTCTCTGGTACACTACGCCGGCACTGTGGACTACAACATCACTGGCTGGCTGGAGAAGAACAAGGACCCCCTGAACGAATCAGTTATTCTGATGTACGGGAAGGCCTCAGTCAAACTGTTGGCTGCCCTGTACCCTGCTGCCCCACCTGAGGATACAACCAAGAAAGGAGGCAAGAAGAAGGGTGGATCCATGCAGACTGTATCGTCCCAGTTCAGGGAGAACTTGGGCAAGCTGATGACCAACTTGAGGAGCACTCATCCTCACTTTGTGCGCTGCCTGATCCCCAACGAGTCAAAGACTCCAGGTCTGATGGAGAACTTCCTGGTTATCCACCAGCTCAGGTGTAATGGTGTTCTGGAGGGTATCAGGATCTGCAGAAAGGGCTTCCCCAGCAGAATCATCTATGCTGACTTCAAGCAGAGGTATAAAGTACTGAATGCCAGTGTCATCCCCGAGGGCCAGTTCATGGACAACAAGAAGGCTTCTGAGAAGCTACTTGGGTCCATTGATATAAATCACGAGGATtataagtttggacacaccaagGTGTTCTTCAAAGCCGGTCTGCTGGGGgtcctggaggagatgagagatgagaagcTAGCAGCTCTGGTCGGCATGGTCCAGGCTCTCAGCCGTGGATTCCTCATGAGGAAAGAATTCACcaagatgatggagaggagAGAGGCCATCTTCTCCATCCAGTACAACATCCGCTCATTCATGAATGTGAAAACTTGGCCATGGATGAAGTTGTACTTCAAGATCAAGCCCCTGCTGAAGAGTGCTGAGACTGAGAAGGAGCTGGCCAACATGAAGGAGAACTATGAGAAGATGAAGACAGACCTGGCCAAGGCTCTGGCCAAGAAGAAGGAGTTGGAGGAAAAGATGGTGTCCCTGCTGCAAGAGAAAAACGACCTGGCACTCCAAGTCACATCTGAATCAGAGAATCTGAACGATGCTGAGGAAAGGTGCGAGGGGCTCATCAAGAGCAAGATCCAGCTGGAGGCCAAACTCAAAGAGACGACTGAGaggctggaggatgaggaggagatgaaTGCTGAGTTGACTGCCAAGAAGAGGAAGCTTGAGGATGagtgctctgagctgaagaaggaCATTGATGACCTGGAGCTCACCCTAGCCAAAGTGGAGAAGGAGAAGCACGCCACTGAAAACAAGGTTAAAAACCTGACAGAGGAGATGGCGTCTATGGATGAGAGTGTTGCCAAGCTGACCAAGGAGAAGAAAGCCCTCCAAGAGGCCCACCAGCAGACACTGGACGACCTGCAGTCAGAGGAGGACAAAGTCAACACTCTGACCAAGGCCAAGACCAAGCTGGAACAGCAAGTGGACGACCTTGAGGGTTCTCTGGAGCAAGAGAAGAAGCTCCGTATGGACCTTGAGAGAGCCAAGAGAAAGCTGGAGGGAGATCTGAAACTGGCCCAGGAGTCCATAATGGACCTGGAGAATGACAAGCAGCAAGCCGATGAGAAAATCAAGAAAAAGGAGTTTGAGACCAGCCAGCTCCTCAGCAAGGTTGAGGATGAACAGTCTCTGGGAGCTCAGTTGCAGAAGAAGATCAAGGAACTCcaggcCCGTattgaggagctggaggaggaaatTGAGGCTGAGCGTGCTGCCAGGGCTAAGGTTGAGAAGCAGAGGGCCGATCTCTCCAGGGAACTTGAGGAGATCAGCGAGAGGCTGGAGGAGGCCGGTGGCGCCACTGCTGCTCAGATTGAGATGAACAAGAAGCGTGAGGCTGAGTTCCAGAAGCTGCGTCGTGATCTTGAAGAGTCCACTTTGCAGCATGAGGCCACAGCCGCCGCTCTGCGCAAGAAGCAGGCCGACAGCGTGGCTGAGCTCGGGGAGCAGATCGACAACCTGCAACGCGTCAAGCAGAAGCTAGAGAAGGAGAAGAGCGAGTACAAGATGGAGATTGATGACCTCTCCAGCAACATGGAGGCCGTCGCCAAGGCTAAGGGCAATCTGGAGAAGATGTGCCGTACTCTTGAGGACCAGCTGAGTGAGCTCAAGACTAAGAATGATGAGAATTCTCGCCAGATCAACGACATCAGTGGACAGAGGGCCAGACTCCTGACAGAAAATGGTGAGTTTGGACgccagctggaggagaaggaaGCCCTGGTGTCTCAGCTGACCAGAGGAAAACAGGCCTTCATCCAACAGGTTGAGGAGCTGAAGAGGCAGATTGAGGAGGAGGTCAAGGCTAAAAACGCCCTGGCCCACGGTGTCCAGTCTGCCCGCCATGACTGTGACCTCCTGAGAGAGCAGtttgaggaggagcaggaggccaAGGCAGAGCTGCAGCGCGGCATGTCCAAGGCCAACAGTGAGGTGGCTCAGTGGAGGACTAAGTATGAAACTGATGCCATCCAACGcacagaggagctggaggaggccaAGAAGAAGCTGGCCCAGCGACTGCAGGATGCTGAGGAGACCATTGAGGCGACCAACTCCAAGTGCGCCTCCCTGGAGAAGACCAAGCAGAGGctgcagggagaggtggaggacctCATGATTGACGTTGAGAGAGCCAACGCAATGGCCGCCAACCTAGACAAGAAGCAGCGGAACTTTGACAAGGTCCTGGCAGAGTGGAAGCAGAAATATGAGGAGAGCCAGGCTGAGCTGGAAGGAGCTCAGAAGGAGGCTCGCTCTATGAGCACTGAACTCTTCAAGATGAAGAACTCCTACGAGGAGGCTCTGGATCATCTGGAGActctgaagagagagaacaagaacctGCAACaggagATCTCTGATCTGACTGAGCAGATCGGAGAGACTGGCAAGAGCATCCATGAGTTGGAGAAGGCCAAGAAGACCGTGGAGACAGAGAAGTCTGAGATCCAGACCGCTCTGGAGGAGGCGGAGGGAACACTGGAGCACGAAGAATCCAAGATTCTGCGTGTGCAGCTGGAGCTGAACCAGATCAAGGGTGAGGTGGACAGGAAGCTGGCTGAGAAGGACGAGGAGATGGAGCAGATCAAGAGGAGCAGCCAGAGGATGGTTGACTCCATGCAGAGCACCCTGGACTCTGAGGTCAGGAGCAGGAATGACGCCCTGAGggtgaagaagaagatggagggagacctGAACGAGATGGAGATCCAGCTGAGCCACTCCAACAGGCAGGCGGCTGAGGCCCAGAAACAGCTGAGGAACGTCCAGGGACTGCTCAAGGATGCCCAATTGCACCTTGATGACGCTGTCCGTGCCTCAGAGGACATGAAGGAACAGGTAGCCATGGTGGAGCGCAGGAACGGTCTGATGGTGGCTGAAATTGAGGAGCTGAGAGTTGctctggagcagactgagagagGCCGCAAAGTGGCTGAAACTGAGCTGGTAGATGCCAGCGAGCGCGTTGGACTGCTGCACTCCCAGAACACCAGCCTTCTGAACACCAAGAAGAAGCTGGAGACTGACCTGGTGCAGGTGCAGGGAGAGGTTGAGGACATTGTCCAGGAGGCTAGAAATGCAGAGGAGAAGGCCAAGAAGGCCATCACTGACGCGGCCATGATGGCtgaggagctgaagaaggagcaggACACCAGTTCTCACCtggagaggatgaagaagaacctGGAGGTCACAGTCAAGGACCTGCAGCACCGACTGGATGAGGCTGAGAATCTGGCCATGAAGGGAGGCAAGAAGCAGCTCCAGAAACTGGAGTCCAGGGTGCGCGAGCTCGAGACTGAGGTGGAGGCTGAGCAGAGAAGAGGTGCAGACGCAGTCAAGGGAGTCCGCAAGTATGAGCGCAGAGTCAAGGAGCTCACTTACCAGACTGAGGAGGATAAGAAGAACGTTGGCAGACTTCAGGACCTGGTAGATAAGCTGCAGATGAAAGTGAAGGCCTACAAGAGACAGGCTGAGGAAGCGGAGGAACAAGCCAACGGCCACATGTCTAAGTTCCGGAAGGTTCAGCATGAACTGGAGGAGGCTGAGGAGCGTGCTGACATCGCTGAGACTCAAGTCAACAAGCTCAGAGCCAAGACCCGCGACACTGGAAAGGGAAAAGAAGTTGCTGAATAAACAAGACCGAAGTCTTATATCATTTTCCTGTGTTGcataaaatatgattttcatggTGAAAATGATTGTTGATTaaaaacatgtaggcctacata

Function

NR:

description
myosin heavy chain, fast skeletal muscle-like

GO: NA

KEGG:

id description
K24220 MYH1s; myosin heavy chain 1/2/3/4/8/13/7B/15

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021614109.2 True 5939 mRNA 0.52 40 85739005 85760958

Neighbor

gene id symbol gene type direction distance location
LOC118965641 NA coding upstream 25799 85709654 ~ 85713206 (+)
LOC110530827 LOC106569812 coding upstream 30235 85690520 ~ 85708770 (+)
LOC110530829 mul1b coding upstream 75948 85658600 ~ 85663057 (+)
vipr1a LOC106569811 coding upstream 100951 85532159 ~ 85638054 (+)
LOC110530830 LOC106583328 coding upstream 120678 85617604 ~ 85618327 (+)
LOC110531032 LOC106569814 coding downstream 32042 85793000 ~ 85881217 (+)
LOC110530844 LOC105030448 coding downstream 591316 86352274 ~ 86555806 (+)
LOC110504868 LOC106569793 coding downstream 808742 86569700 ~ 86583738 (+)
LOC110530851 LOC106569794 coding downstream 830552 86591510 ~ 86629379 (+)
ly97.3 LOC106596797 coding downstream 1151219 86912176 ~ 86920513 (+)
G757243 NA non-coding upstream 56416 85682344 ~ 85682589 (+)
G757235 NA non-coding upstream 74865 85663104 ~ 85664140 (+)
G757232 NA non-coding upstream 86451 85652177 ~ 85652554 (+)
G757226 NA non-coding upstream 91165 85647608 ~ 85647840 (+)
G757220 NA non-coding upstream 95926 85642867 ~ 85643079 (+)
G757354 NA non-coding downstream 38938 85799896 ~ 85800353 (+)
G757358 NA non-coding downstream 43525 85804483 ~ 85805327 (+)
G757378 NA non-coding downstream 102221 85863179 ~ 85863889 (+)
G757346 NA non-coding downstream 120741 85881699 ~ 85882385 (+)
G757345 NA non-coding downstream 121593 85882551 ~ 85883276 (+)
LOC118965572 NA other upstream 474912 85256782 ~ 85264093 (+)
G756298 NA other upstream 801261 84936066 ~ 84937744 (+)
G756271 NA other upstream 860926 84876994 ~ 84878079 (+)
G756134 NA other upstream 1177114 84558786 ~ 84561891 (+)
G755602 NA other upstream 1430731 84303470 ~ 84308274 (+)
G757472 NA other downstream 191010 85951968 ~ 86028274 (+)
G757663 NA other downstream 356705 86117663 ~ 86117948 (+)
G757754 NA other downstream 469393 86230351 ~ 86231459 (+)
G757902 NA other downstream 770195 86531153 ~ 86532379 (+)
G758045 NA other downstream 873826 86634784 ~ 86635460 (+)

Expression


Co-expression Network