Item | Value |
---|---|
gene id | LOC118965578 |
gene name | NA |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048572.1 |
NCBI id | CM023226.2 |
chromosome length | 91622588 |
location | 86868307 ~ 86873801 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
Transposable element Tc1 transposase |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036986637.1 | False | 4274 | mRNA | 0.49 | 2 | 86869498 | 86873801 |
XM_036986638.1 | False | 4184 | mRNA | 0.49 | 2 | 86869498 | 86873801 |
TU861801 | True | 2334 | lncRNA | 0.43 | 3 | 86868307 | 86870885 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110530853 | LOC106569760 | coding | downstream | 12040 | 86775438 ~ 86857458 (-) |
abca4b | LOC103146343 | coding | downstream | 105712 | 86630136 ~ 86763786 (-) |
LOC118965642 | NA | coding | downstream | 312948 | 86553529 ~ 86556550 (-) |
LOC118965645 | zgc:158463 | coding | downstream | 680291 | 86187371 ~ 86189207 (-) |
LOC118965647 | NA | coding | downstream | 682698 | 86186647 ~ 86186800 (-) |
LOC110531045 | LOC106569759 | coding | upstream | 155 | 86873956 ~ 86892833 (-) |
LOC110529151 | LOC106569758 | coding | upstream | 22883 | 86896684 ~ 86903955 (-) |
LOC110517235 | LOC106592571 | coding | upstream | 46800 | 86920601 ~ 86953377 (-) |
LOC110517127 | vapa | coding | upstream | 920323 | 87794124 ~ 87824786 (-) |
LOC110530881 | LOC106569740 | coding | upstream | 960873 | 87834674 ~ 87846312 (-) |
G758227 | NA | non-coding | downstream | 2657 | 86866616 ~ 86866841 (-) |
G758225 | NA | non-coding | downstream | 3541 | 86865747 ~ 86865957 (-) |
G758196 | NA | non-coding | downstream | 66306 | 86802092 ~ 86803192 (-) |
G758189 | NA | non-coding | downstream | 76862 | 86790481 ~ 86792636 (-) |
G758167 | NA | non-coding | downstream | 98212 | 86769665 ~ 86771286 (-) |
G758550 | NA | non-coding | upstream | 22121 | 86895922 ~ 86896563 (-) |
G758552 | NA | non-coding | upstream | 26266 | 86900067 ~ 86900319 (-) |
G758538 | NA | non-coding | upstream | 38452 | 86912253 ~ 86920481 (-) |
G758557 | NA | non-coding | upstream | 48936 | 86922737 ~ 86923303 (-) |
G758580 | NA | non-coding | upstream | 108975 | 86982776 ~ 86983243 (-) |
G757788 | NA | other | downstream | 637306 | 86230374 ~ 86308150 (-) |
G757422 | NA | other | downstream | 1005611 | 85863011 ~ 85863887 (-) |
G757292 | LOC106569817 | other | downstream | 1114260 | 85703130 ~ 85756434 (-) |
G756981 | NA | other | downstream | 1454796 | 85413431 ~ 85414702 (-) |
G757086 | NA | other | downstream | 1465971 | 85402618 ~ 85404005 (-) |
LOC110530858 | NA | other | upstream | 1067103 | 87940808 ~ 87943613 (-) |
G759421 | NA | other | upstream | 1557403 | 88430998 ~ 88443468 (-) |
G759982 | NA | other | upstream | 1661839 | 88535640 ~ 88536047 (-) |
G759998 | NA | other | upstream | 1789803 | 88638913 ~ 88667229 (-) |
G760051 | NA | other | upstream | 1829190 | 88702991 ~ 88704054 (-) |