Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110530873 |
| gene name | LOC106596679 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 87891226 ~ 87934005 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| twisted gastrulation protein homolog 1-A-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036986655.1 | True | 1413 | mRNA | 0.52 | 5 | 87891226 | 87934005 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ralbp1 | ralbp1 | coding | downstream | 14481 | 87849871 ~ 87876745 (-) |
| LOC110530881 | LOC106569740 | coding | downstream | 44914 | 87834674 ~ 87846312 (-) |
| LOC110517127 | vapa | coding | downstream | 66440 | 87794124 ~ 87824786 (-) |
| LOC110517235 | LOC106592571 | coding | downstream | 937849 | 86920601 ~ 86953377 (-) |
| LOC110529151 | LOC106569758 | coding | downstream | 987271 | 86896684 ~ 86903955 (-) |
| LOC110530858 | NA | coding | upstream | 6803 | 87940808 ~ 87943613 (-) |
| LOC110531046 | ankrd12 | coding | upstream | 10254 | 87944259 ~ 88001120 (-) |
| LOC110530857 | ndufv2 | coding | upstream | 68848 | 88002853 ~ 88017103 (-) |
| LOC110518901 | LOC106596607 | coding | upstream | 143196 | 88077201 ~ 88331495 (-) |
| LOC110509139 | rab12 | coding | upstream | 408450 | 88342455 ~ 88362306 (-) |
| G759134 | NA | non-coding | downstream | 9657 | 87846936 ~ 87881569 (-) |
| G759171 | NA | non-coding | downstream | 27744 | 87862623 ~ 87863482 (-) |
| G759168 | NA | non-coding | downstream | 38105 | 87852776 ~ 87853121 (-) |
| G759139 | NA | non-coding | downstream | 98400 | 87735024 ~ 87792826 (-) |
| G759209 | NA | non-coding | upstream | 48161 | 87982166 ~ 87983112 (-) |
| G759225 | NA | non-coding | upstream | 126688 | 88060693 ~ 88064651 (-) |
| G759242 | NA | non-coding | upstream | 142758 | 88076763 ~ 88076982 (-) |
| G759243 | NA | non-coding | upstream | 144697 | 88078702 ~ 88080458 (-) |
| G759246 | NA | non-coding | upstream | 146975 | 88080980 ~ 88081384 (-) |
| G757788 | NA | other | downstream | 1659034 | 86230374 ~ 86308150 (-) |
| G757422 | NA | other | downstream | 2027339 | 85863011 ~ 85863887 (-) |
| G757292 | LOC106569817 | other | downstream | 2135988 | 85703130 ~ 85756434 (-) |
| G756981 | NA | other | downstream | 2476524 | 85413431 ~ 85414702 (-) |
| G757086 | NA | other | downstream | 2487699 | 85402618 ~ 85404005 (-) |
| G759421 | NA | other | upstream | 497199 | 88430998 ~ 88443468 (-) |
| G759982 | NA | other | upstream | 601635 | 88535640 ~ 88536047 (-) |
| G759998 | NA | other | upstream | 729599 | 88638913 ~ 88667229 (-) |
| G760051 | NA | other | upstream | 768986 | 88702991 ~ 88704054 (-) |
