Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110518901 |
| gene name | LOC106596607 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 88077201 ~ 88331495 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: microtubule cross-linking factor 1 isoform X4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036986668.1 | False | 6644 | mRNA | 0.58 | 17 | 88077201 | 88331495 |
| XM_036986665.1 | False | 6923 | mRNA | 0.58 | 17 | 88085908 | 88331494 |
| XM_036986663.1 | False | 6930 | mRNA | 0.58 | 17 | 88085908 | 88331495 |
| XM_036986667.1 | False | 6588 | mRNA | 0.58 | 18 | 88086276 | 88331495 |
| XM_036986669.1 | False | 6592 | mRNA | 0.58 | 18 | 88086282 | 88331495 |
| XM_036986666.1 | True | 6591 | mRNA | 0.58 | 18 | 88086284 | 88331495 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530857 | ndufv2 | coding | downstream | 60098 | 88002853 ~ 88017103 (-) |
| LOC110531046 | ankrd12 | coding | downstream | 76081 | 87944259 ~ 88001120 (-) |
| LOC110530858 | NA | coding | downstream | 133588 | 87940808 ~ 87943613 (-) |
| LOC110530873 | LOC106596679 | coding | downstream | 143196 | 87891226 ~ 87934005 (-) |
| ralbp1 | ralbp1 | coding | downstream | 200456 | 87849871 ~ 87876745 (-) |
| LOC110509139 | rab12 | coding | upstream | 10960 | 88342455 ~ 88362306 (-) |
| LOC110531049 | LOC106591876 | coding | upstream | 48442 | 88379937 ~ 88570992 (-) |
| LOC110530889 | LOC103396682 | coding | upstream | 339970 | 88671465 ~ 88819127 (-) |
| LOC110530888 | LOC106569654 | coding | upstream | 496576 | 88827984 ~ 88833229 (-) |
| pak1ip1 | pak1ip1 | coding | upstream | 503062 | 88834557 ~ 88846601 (-) |
| G759242 | NA | non-coding | downstream | 219 | 88076763 ~ 88076982 (-) |
| G759225 | NA | non-coding | downstream | 12550 | 88060693 ~ 88064651 (-) |
| G759209 | NA | non-coding | downstream | 94089 | 87982166 ~ 87983112 (-) |
| G759184 | NA | non-coding | downstream | 163771 | 87906440 ~ 87913430 (-) |
| G759180 | NA | non-coding | downstream | 176026 | 87900392 ~ 87901175 (-) |
| G759346 | NA | non-coding | upstream | 1602 | 88333097 ~ 88334683 (-) |
| G759349 | NA | non-coding | upstream | 6999 | 88338494 ~ 88341360 (-) |
| G759364 | NA | non-coding | upstream | 38507 | 88370002 ~ 88370786 (-) |
| G759371 | NA | non-coding | upstream | 42749 | 88374244 ~ 88374566 (-) |
| G759378 | NA | non-coding | upstream | 47478 | 88378973 ~ 88379339 (-) |
| G757788 | NA | other | downstream | 1845009 | 86230374 ~ 86308150 (-) |
| G757422 | NA | other | downstream | 2213314 | 85863011 ~ 85863887 (-) |
| G757292 | LOC106569817 | other | downstream | 2321963 | 85703130 ~ 85756434 (-) |
| G756981 | NA | other | downstream | 2662499 | 85413431 ~ 85414702 (-) |
| G759421 | NA | other | upstream | 99709 | 88430998 ~ 88443468 (-) |
| G759982 | NA | other | upstream | 204145 | 88535640 ~ 88536047 (-) |
| G759998 | NA | other | upstream | 332109 | 88638913 ~ 88667229 (-) |
| G760051 | NA | other | upstream | 371496 | 88702991 ~ 88704054 (-) |
