LOC110530871 (dnajb4)


Basic Information

Item Value
gene id LOC110530871
gene name dnajb4
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 88991233 ~ 89060503 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036986709.1
TATTGTTGACCGCGGAGCAGCCTGTGTGTTTTATACAGTCGGAGAGACCGTGGAACAAGGAAGACACCGGGCCACACGGTCGTCACCTACCTGTTGAATATTACCTACTGTTTAATGATAGAGTCAGGTGTTGGGTTGACAACTTACTCACTGTCGGAGAACAAAGTCGAACCTGGGGATAAAGGATAGTCAGTCGAGTTTAGTCGAGGTAAAGGCGGAAGGAAGGAGGATTTGTGGAAGAGGTAGCCACTCCAATGTTTTaaccggacagacagacagacagaccaccggATTTATCAACAGACCAGAAACAGATTTATTGACGCCGCCACACGATGCCTTTAGGACTGAGACGAAAGAAGAACAAGTCGAGGGAGAGCTCGAACCTGGTGGAGAATGAGGAGGTCGGTGGACACACCGGTGGGCGCTCCGTGAAGTCGACCGTAAACGGAGCGGGGCTCCCACCGCCACCTGCCAACCTGCGGCCCAAACTAGTGTTCCACACTCAGCTCGCCCACGGCAGCCCCACGGGAAGGATCGAGGGATTTAGTAACGTCAAAGAACTCTACGGGAAAATAGCTGAGACGTTCAATTTAAGTCAACCGGAGaTCCTGTTCTGTACATTGAACACCCATAAGATCGACATGGAGAAGCTGCTTGGTGGTCAGATCGGCCTGGAGGACTTTATATTCGCCCACATTAAAGGGATTAAGAAGGAGGTGGAGGTGTTTAAGTCAGAGGACGCCCTGGGCCTCACCATCACAGACAACGGGGTGGGATACGCCTTCACCAAGCGTATCAAGGAGGGCAGTGTGGTGGACAAGGTGAAGGTGATCTCTGTAGGAGACCACATAGAATGCATCAACGGGAAGAACATTGTGGGATCACGTCACTACGAGGTGGCTCGCATGCTGAAGGAGCTGCCGAAAGACCAGATGTTCACCCTCAAACTGGTGGAGCCCATGAAGGCCTTCGAGATGCTGGAGCCGCGGTCGAAGGGAGCCAAGGAGGCCAGTGACAATAAgatggggacagggagagggactcTGAGACTTCGCTCCAGGGGCCCTGCTACCGTAGAGGAAGTGCCGACAGAGTTTGAGGAGAGAGCAGTGAAGAAGGTGGATGACCTACTGGAGACTTACATGGGTATCAGAGATACAGAACTGGCGGCGACCATGGTGGAGGTGGGTCGGGACAAGAAGAACCCTGATGAGTTTGCCATGGCTCTGGACGAGGCTCTCGGGGACTTCGCTTTTCCTGATGAGTTTGTGTTCGACGTCTGGGGCGCTATCGGAGACGCCAAACAGGGACACGTTTTAACTTCCCCCTGATTCccttgcctggtcccagatctgtttacagCTGGCAAGACCTCACAAACAGATCTGCGACTAGGgctttagcctggtcccagatctgtttacagCTGGCAAGACCTCACAAACAGATCTGCGACCAGGCTACCAATCCCCCTGAGTACCACAGCTCCACATCTTCAACCAGCCAACTGGACAAATACCAGCCAGTAGAGAAAGAGGCTACGGGTGcctctgttttgtagggttaccAGTGTTGCACCCTAAAAGACAGAATCACTTCAGTCATGTCCCACTCAACCTAGTTTTctgcttgtgtcccaaatggccccctcatattccctttatagtgcactactcataGGGCCCTGgccaaacgtagtgcactatataggaaatagtgtgctatttgggatatacattctatgtcctttttccACAGGTTACAAAAGGGTTCTGATGTCTGAATCACCACTACAGCACTTGTCTTTACTGACTGTGGTGAACCGACACTGAGGATCACATACAGTAGACTACTGTATATCAGGGCTTTAATGACTGTGGTGAACTGACACTGAGGATCACATACAGTAGACTACTGTATATCAGGGCTTTAATGACTGTGGTGAACCGACACTGAGGATCACATACAGTAGACTACTGTATATCAGGGCTTTAATGACTGTGGTGAACCGACACTGAGGATCACATACAGTAGACTACTGTATATCAGGGCTTTAATGACTGTGGTGAACCGACACTGAGGATCACATACAGTAGACTACTGTATATCAGGGCTTTATTGACTGTGGTGAACCGACACTGAGGATCACATACAGTAGACTACTGTATATCAGGGCTTTAATGACTGTGGTGAACCGACACTGAGGATCACATACAGTAGACTACTGTATATCAGGGCTTTAATGACTGTGGTGAACCGACACTGAGGATCACATACAGTAGACTACTGTATATCAGGGCTTTATTGACTGTGGTGAACCGACATGGTGTTCACATACAGTAGACTACTGTATATCAGGGCTTTAATGACTGTGGTGAACCGACACTGAGGATCACATACAGTAGACTACTGTATATCAGGGCTTTAATGACTGTGGTGAACCGACACTGAGGATCACATACAGTAGACTACTGTATATCAGGGCTTTAATGACTGTGGTGAACTGACACTGAGGATCACATACAGTAGACTACTGTATATCAGGGCTTTTTAGAATAGTTCTTAAAATGTTGCTGTGGAGTCTGAACAGCAGCGATGTAATTATAGTGATGTATTATATAGCGATACTTCTGTTAAAGacccccccaccctcctctaCTCCATCGATATATCATGTCTTAAAAACAAGCCTGGCCTTTGGACCATAAGACTATACCTGTGACTGATATAATGACTGATATAGTgactgatatagagactgatatagagactgatatagtgactgatataatgactgatatagagactgatatagagact

Function

symbol description
dnajb4 Predicted to enable chaperone binding activity and unfolded protein binding activity. Predicted to be involved in chaperone cofactor-dependent protein refolding. Predicted to act upstream of or within protein folding. Predicted to be active in cytosol. Orthologous to human DNAJB4 (DnaJ heat shock protein family (Hsp40) member B4).

NR:

description
PREDICTED: dnaJ homolog subfamily B member 4 isoform X3

GO: NA

KEGG:

id description
K20056 GIPC, SEMCAP; PDZ domain-containing protein GIPC

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036986709.1 True 2823 mRNA 0.48 6 88991233 89060503

Neighbor

gene id symbol gene type direction distance location
LOC110530883 LOC106569748 coding downstream 19424 88923723 ~ 88971809 (-)
LOC110530884 LOC106569698 coding downstream 71994 88905312 ~ 88919239 (-)
LOC110530885 LOC106569697 coding downstream 108217 88864561 ~ 88883016 (-)
pak1ip1 pak1ip1 coding downstream 144632 88834557 ~ 88846601 (-)
LOC110530888 LOC106569654 coding downstream 158004 88827984 ~ 88833229 (-)
LOC110530869 LOC106569754 coding upstream 4755 89065258 ~ 89073172 (-)
miga1 miga1 coding upstream 65965 89126468 ~ 89148695 (-)
LOC118965582 st6galnac5 coding upstream 292207 89352710 ~ 89408042 (-)
LOC110530890 LOC106569838 coding upstream 528834 89589337 ~ 89634342 (-)
LOC118965584 LOC106592566 coding upstream 528836 89589339 ~ 89598617 (-)
G760147 NA non-coding downstream 14197 88975087 ~ 88977036 (-)
G760141 NA non-coding downstream 36212 88954674 ~ 88955021 (-)
G760125 NA non-coding downstream 82981 88908005 ~ 88908252 (-)
G760103 NA non-coding downstream 87479 88903428 ~ 88903754 (-)
G760191 NA non-coding upstream 29957 89090460 ~ 89094398 (-)
G760181 NA non-coding upstream 52143 89112646 ~ 89118302 (-)
G760244 NA non-coding upstream 136029 89196532 ~ 89197593 (-)
G760247 NA non-coding upstream 143308 89203811 ~ 89204225 (-)
G760257 NA non-coding upstream 159628 89220131 ~ 89223712 (-)
G760051 NA other downstream 287179 88702991 ~ 88704054 (-)
G759998 NA other downstream 326093 88638913 ~ 88667229 (-)
G759982 NA other downstream 455186 88535640 ~ 88536047 (-)
G759421 NA other downstream 547765 88430998 ~ 88443468 (-)
G760182 LOC106569755 other upstream 18795 89079298 ~ 89081345 (-)
G760192 LOC106569753 other upstream 39341 89099844 ~ 89102382 (-)
G760306 NA other upstream 270778 89331281 ~ 89332776 (-)
G760362 NA other upstream 474120 89534623 ~ 89535353 (-)

Expression


Co-expression Network