LOC110530869 (LOC106569754)


Basic Information

Item Value
gene id LOC110530869
gene name LOC106569754
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 89065258 ~ 89073172 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036986710.1
ATAAATATCACGGGGTCCACAGCTCTGAGTAATCACTCTAAACGTAGCTAGGCTACTTAATCTATCTGTAGCTGTTCACTGTTCAACTGCCTGACTGTGTGTCAGTGTCTGGCTGGCGCTGATATTATTGTTGAGAGTTGCAGAGAGAGCAGCGGTTAAGTTTTCCACTTGTCGCCATATCAGAGGGGTCTCTGTCCCCTGGATATATTTTCATAGCGGATTGACTGACAGGCAGCGTCCGTCAAACACCAGCGGGTTCTCTTCTCTCCAGCGCAGGGCCGCTTCGGGGAAACTATGGGGAAAGATTATTATAAAATCCTGGGGATAGTGAAAGGAGCGGCCGACGAGGATATCAAGAAGGCGTACAGAAAAcaggctctgaaatggcacccggACAAAAACAAGGCGGCCAACGCCGAGGAGAAATTTAAGGAGATCGCCGAGGCATATGAAGTCCTCAGTGATCCGAAGAAAAGGGAGATATATGATCAGTATGGAGAGGAAGGTCTCAAAGGAGGTCCCAGTAGTGGTCCAGATGACCAGGGCAGCAACTTCACCTCCTACACATTCCACGGAGACCCCCATGCCACCTTCGCCACCTTCTTCGGCGGTGCCAACCCTTTCGAGATGTTCTTCGGACGCAAGGCTAACGGGCGCGGTCCGGGCGGAGACGACGAGGACATGGACGTGGACGGCAACGACCCGTTCGGCTCCTTCACCTCGTTTAACCTCAACGGGTTTCCTCGGGACCGCCACGTGGGGCTGGGCGGGCAGCAGAGGAGGAAGCAGGACCCGGCCGTCCATCACGAGCTGCGGGTGTCGCTGGAGGAAGTGTTTCATGGTTGCACCAAGAGGATGAAGATCAGCAGGAAGAGGATGAACCCTGACGGACGGACCATGAGGACGGAGGATAAGATTCTCACCATAGAGATTAAGAGAGGGTGGAAGGAGGGGACCAAGATCACGTTCCCCAGAGAAGGAGACGAGTCGCCCAATACCATCCCTGCTGATATCGTGTTCGTCATCAAGGACAAGCCCCACATGCACTTTAGAAGGGAGGGGTCGGACATCGTGTACCCGGTGAAAGTTAGTCTACGACAGTCGTTGTGTGGTTGCTCGGTGACCGTGTCTACGATAGACGGGAAGACGTGTAACATGAAGATCACGGATGTGATAAAACCAGGCATGAGACAGACTGTAGCAGGACAGGGCCTCCCCTTACCCAAGAACCCCGAGCAGAGAGGTGACCTGGTGGTGGAGTTTGACGTAAACTTTCCTGAGAGTCTCCCCAGCAACGCCAAGGATGTCCTGAAGAGGCATTTACCTGCTTCCTAgaagaacagacacacagagagacacagagagacagagagacacggagagacagagagacatggagagacagagagacagacacacagagagacacggagagacagagagacacggagagacagagagacacggagagacagagagacacggagagaaagagagacagacacacagagagacaga

Function

NR:

description
PREDICTED: dnaJ homolog subfamily B member 4-like

GO:

id name namespace
GO:0006457 protein folding biological_process
GO:0051082 unfolded protein binding molecular_function

KEGG:

id description
K09510 DNAJB4; DnaJ homolog subfamily B member 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036986710.1 True 1518 mRNA 0.53 3 89065258 89073172

Neighbor

gene id symbol gene type direction distance location
LOC110530871 dnajb4 coding downstream 4755 88991233 ~ 89060503 (-)
LOC110530883 LOC106569748 coding downstream 93449 88923723 ~ 88971809 (-)
LOC110530884 LOC106569698 coding downstream 146019 88905312 ~ 88919239 (-)
LOC110530885 LOC106569697 coding downstream 182242 88864561 ~ 88883016 (-)
pak1ip1 pak1ip1 coding downstream 218657 88834557 ~ 88846601 (-)
miga1 miga1 coding upstream 53296 89126468 ~ 89148695 (-)
LOC118965582 st6galnac5 coding upstream 279538 89352710 ~ 89408042 (-)
LOC110530890 LOC106569838 coding upstream 516165 89589337 ~ 89634342 (-)
LOC118965584 LOC106592566 coding upstream 516167 89589339 ~ 89598617 (-)
LOC118965585 NA coding upstream 532775 89605947 ~ 89607379 (-)
G760158 NA non-coding downstream 55835 89008016 ~ 89009423 (-)
G760157 NA non-coding downstream 57359 89007248 ~ 89007899 (-)
G760147 NA non-coding downstream 88222 88975087 ~ 88977036 (-)
G760141 NA non-coding downstream 110237 88954674 ~ 88955021 (-)
G760191 NA non-coding upstream 17288 89090460 ~ 89094398 (-)
G760181 NA non-coding upstream 39474 89112646 ~ 89118302 (-)
G760244 NA non-coding upstream 123360 89196532 ~ 89197593 (-)
G760247 NA non-coding upstream 130639 89203811 ~ 89204225 (-)
G760257 NA non-coding upstream 146959 89220131 ~ 89223712 (-)
G760165 NA other downstream 47279 89017049 ~ 89017979 (-)
LOC110530888 LOC106569654 other downstream 233530 88827984 ~ 88833229 (-)
G760051 NA other downstream 361204 88702991 ~ 88704054 (-)
G759998 NA other downstream 400118 88638913 ~ 88667229 (-)
G759982 NA other downstream 529211 88535640 ~ 88536047 (-)
G760182 LOC106569755 other upstream 6126 89079298 ~ 89081345 (-)
G760192 LOC106569753 other upstream 26672 89099844 ~ 89102382 (-)
G760306 NA other upstream 258109 89331281 ~ 89332776 (-)
G760362 NA other upstream 461451 89534623 ~ 89535353 (-)

Expression


Co-expression Network