slc25a24l (LOC106569755)


Basic Information

Item Value
gene id slc25a24l
gene name LOC106569755
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 89074624 ~ 89139486 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021614153.2
TCGTCATCATGTCTATCGCAGTAGAGGAGCATCTACCGCATTGAAGACATGTTCAGTCGGGCTGCCGGTGCTTTATGACTCAGCGTTCATATGGAGAAAAAAAGAAGATGAAGCACATTGCCTTTGCACCTTAATAGCCTGTAGTTGTAGTATTTGTAGAATTGGTGCTTATTTATATTCCATTTCAAATTttgtaattaaaaaaatatatatattattgaagAATCATGGATCAGTTTCGTGGTTTGTTTGTGAAACTAGACAAGAATAACGACGGGTCTATATCAGTGGAAGAACTTCATAATGAGATGAAAAAAACGGGCATTATGGCTGCAGATCAGAAGGCTCAGACTGTCGTTAATAACTATGACCGAAACAAGGATGGACGTTTAGATTATGACGAATTTCTAAGCTATATGAGTGACAGAGAGAAGAAATGGAGAATTCACTTCATGGCCCTTGACAAGAATAAATGCGGGGTCATTGGCCAGGAGGAAATCATAGATCTGTTCAAGGAGTTAGGAGTGAACATATCAAAGCCGAATGCAAAAAGAATTATACAAATGATGGATGAGGACAGTTCTATGACCGTGGACTGGGGAGAGTTCCTGCAGCATGTCATCCTCAACCCCGCAGAGAACCTGGGAGAACTGGTCACTTCATGGAAACACACTCTGGTGTTTGATGTGGGTGAGAGCCGGACCATGCCCCTGGAGCTGCCCCCGGACCTGTCAGCAGGCTCAGGGGAATGGAGGAGTTTTGTCCTGGCTGCAGGGCTGGCCGACGCCGTGTCCAGAACCCTGACTGCTCCTATCGACCGCCTCAAGACACAACTACAGgTGTATGGATCCAAGGCGTCCTCCCAGGGATTCAGAGAGCTAAAGGCGGGGGGTGTGAGGTCTATGTGGCAGGGAAACGCTGTGAACGTGCTGAAGGGAACCCCCCAGTCAACTCTGCAGTGCCTCATCTACGCTCAGatgAAGGTGTACACCCAGCGCTGGCAGCAGGAGAGTCTGTCAGTACAGCAGAGGTTTgggctgggctgtgtgtctggggCGGTGGCTCATGCTGTCTTCTATCCTCTAGAGGTGCTAAAGGTGAGACTGAACCTATGGGCAGGTACCTACAGCGGGGTGGTGCAGTGTGCCCGCTCCATCTACAGGAATGAGTCTGCTGCATCCTTCTACAGGGGCTTCAGACCCAGTATCCTCTGTATGATTCCCTACGCTGGGGTGGAGTGTGCCGTTCACCAGTTTTGTGGCCTTCTCTGCTGGACAGATAAGCAGCTATCCTCTAGCTGTGATCAGGACCCAGCAGCAAGCTCAGGCTTTCAGTTCAACTTCACCCACAACTTTTCTTCAGGGATTCACAGGCATCTATGAGAGACATGGAATACGAGGATACTACAATGGGATGGGGGCCAGTTTCGTCCGGGCGATTCCATGCGCTCTGTTAAACTACACCTTGATGAAGAAACTAGACACAATGCTTTCCTGATTTCAGAGTCATGGTTAATTATAATTTGTTGTAGGTTTTTGTGAATGATTTTATGTAATACTCTGTACAAAACAACAACCTTCAAACTTGATGCCATTGTCAATAAACTGTCCCAAAATACTTCAAATTGCAATGAACTACCAAATAGAACTACCAAATATACAACCAAAGGACTGTTGTTGGAGGGCTGATTGGGGCCCAATCTCCAGCCTGACCAATCCTTTGTTAACCCCTATTGTCATTAAATCAGTGTGAAGTATC
>XM_021614152.2
CGTCATCATGTCTATCGCAGTAGAGGAGCATCTACCGCATTGAAGACATGTTCAGTCGGGCTGCCGGTGCTTTATGACTCAGCGTTCATATGGAGAAAAAAAGAAGATGAAGCACATTGCCTTTGCACCTTAATAGCCTGTAGTTGTAGTATTTGTAGAATTGGTGCTTATTTATATTCCATTTCAAATTttgtaattaaaaaaatatatatattattgaagAATCATGGATCAGTTTCGTGGTTTGTTTGTGAAACTAGACAAGAATAACGACGGGTCTATATCAGTGGAAGAACTTCATAATGAGATGAAAAAAACGGGCATTATGGCTGCAGATCAGAAGGCTCAGACTGTCGTTAATAACTATGACCGAAACAAGGATGGACGTTTAGATTATGACGAATTTCTAAGCTATATGAGTGACAGAGAGAAGAAATGGAGAATTCACTTCATGGCCCTTGACAAGAATAAATGCGGGGTCATTGGCCAGGAGGAAATCATAGATCTGTTCAAGGAGTTAGGAGTGAACATATCAAAGCCGAATGCAAAAAGAATTATACAAATGATGGATGAGGACAGTTCTATGACCGTGGACTGGGGAGAGTTCCTGCAGCATGTCATCCTCAACCCCGCAGAGAACCTGGGAGAACTGGTCACTTCATGGAAACACACTCTGGTGTTTGATGTGGGTGAGAGCCGGACCATGCCCCTGGAGCTGCCCCCGGACCTGTCAGCAGGCTCAGGGGAATGGAGGAGTTTTGTCCTGGCTGCAGGGCTGGCCGACGCCGTGTCCAGAACCCTGACTGCTCCTATCGACCGCCTCAAGACACAACTACAGgTGTATGGATCCAAGGCGTCCTCCCAGGGATTCAGAGAGCTAAAGGCGGGGGGTGTGAGGTCTATGTGGCAGGGAAACGCTGTGAACGTGCTGAAGGGAACCCCCCAGTCAACTCTGCAGTGCCTCATCTACGCTCAGatgAAGGTGTACACCCAGCGCTGGCAGCAGGAGAGTCTGTCAGTACAGCAGAGGTTTgggctgggctgtgtgtctggggCGGTGGCTCATGCTGTCTTCTATCCTCTAGAGGTGCTAAAGGTGAGACTGAACCTATGGGCAGGTACCTACAGCGGGGTGGTGCAGTGTGCCCGCTCCATCTACAGGAATGAGTCTGCTGCATCCTTCTACAGGGGCTTCAGACCCAGTATCCTCTGTATGATTCCCTACGCTGGGGTGGAGTGTGCCGTTCACCAGtCCATTGTGACCTGGGCTAAGACCCAACAGGACTACAGCAGTGACTCCCAGCTCTTCTTTTTCAGTTTTGTGGCCTTCTCTGCTGGACAGATAAGCAGCTATCCTCTAGCTGTGATCAGGACCCAGCAGCAAGCTCAGGCTTTCAGTTCAACTTCACCCACAACTTTTCTTCAGGGATTCACAGGCATCTATGAGAGACATGGAATACGAGGATACTACAATGGGATGGGGGCCAGTTTCGTCCGGGCGATTCCATGCGCTCTGTTAAACTACACCTTGATGAAGAAACTAGACACAATGCTTTCCTGATTTCAGAGTCATGGTTAATTATAATTTGTTGTAGGTTTTTGTGAATGATTTTATGTAATACTCTGTACAAAACAACAACCTTCAAACTTGATGCCATTGTCAATAAACTGTCCCAAAATACTTCAAATTGCAATGAACTACCAAATAGAACTACCAAATATACAACCAAAGGACTGTTGTTGGAGGGCTGATTGGGGCCCAATCTCCAGCCTGACCAATCCTTTGTTAACCCCTATTGTCATTAAATCAGTGTGAAGTATC
>TU863315
CGGTAAAAAAAGTTGTCACGCCGTAACTCCGCTGCCTCTGCTCTCTCAACCAGTGCtctcaacacacatacacacacacacctctggccctccccctcttctcctctcagcctcttgcgaattgaaggaaaatgacAATTATTATAAATTATTTTTTAATATTGGTCAATGTTTTGGGGGGGaagaagcctggcttcccttggtatCCTTGCATACACGCCACtgttgtagaatctatgccaaggtgcattgaagtaGAAACTCCCACCTAAGGATCTGTTTTCTTCGGCCAACTATTTACTGTGTTCAAGGGAATCGCTGGATCGATTGCTTTGATTTTACTCCTGCGTCTATTTCATACTTTGGCTTGTGTCTATCGTTCTCCCCCCCGTTAACATTACGCCTGTGGAAAGGCTTGTCAATGTCCTGTCAAACACACCCCGGTAACGGCCGAAATGTGTCGAATGAAATACCTTTGTCTTTCCGTTGTATCTATAAAAACGACAAAAGATTAATCTGGCATTTAACGCACTATCTCGACACTTACATCACATGAAAGAGAAGAAACAcgactttatttaaaataaaaaaaa
>TU863313
tagatGCGATGAAATTAAAGCAATTTCCCCCTCAAAAATGAACACTCGGATTATAGTGATATTATTTTCGGATCTCGCAAACAATGCAACATATGTATAGATAGGTCTCTAAGGTGGTTGCAGTCCTATTCCGACCCTTTGTGTTAATGTTTGATATATGCAAATACACCCAGTGTATTTATGCAAATTAGGCATATATCATTTTCTCTATTTTAACACAAGATACAAAAAACAAACCCTGAAACAATtagctaatatatatatatgagtgcatttccccaaaaaacattttttaaattaacaaTAAATTGAATATTGAATTCCCATCAAAATCCCTCTACTCCATTCCTTAGAATCCGTGCCAGTAAAATATTGTATGTGCTATAATTAATTCAAAATCTGATGGATTATACAATTCTAACAGTTTGGACCATCTTCTTCCATTATCCAACTaatgtatttatttgaattgtaaaaaaaaaaaaaacatttttacaaattcgATGACAGTTGCTAATTGGAGCTCGTGGTGGCCCGCCCTATCAAGATGGGTGTTTCTAttgttttggcagttacctgtatgaaCCGTGAATCCGTGGACTGGAGACAGAGGTTAATAATTAAAGAagatattgtgtgtgtatttaggTGTATGGATCCAAGGCGTCCTCCCAGGGATTCAGAGAGCTAAAGGCGGGGGGTGTGAGGTCTATGTGGCAGGGAAACGCTGTGAACGTGCTGAAGGGAACCCCCCAGTCAACTCTGCAGTGCCTCATCTACGCTCAGatgAAGGTGTACACCCAGCGCTGGCAGCAGGAGAGTCTGTCAGTACAGCAGAGGTTTgggctgggctgtgtgtctggggCGGTGGCTCATGCTGTCTTCTATCCTCTAGAGGTACCAGAGCTCTATGACAGGTGCTAAAGGTGAGACTGAACCTATGGGCAGGTACCTACAGCGGGGTGGTGCAGTGTGCCCGCTCCATCTACAGGAATGAGTCTGCTGCATCCTTCTACAGGGGCTTCAGACCCAGTATCCTCTGTATGATTCCCTACGCTGGGGTGGAGTGTGCCGTTCACCAGtCCATTGTGACCTGGGCTAAGACCCAACAGGACTACAGCAGTGACTCCCAGCTCTTCTTTTTCAGTTTTGTGGCCTTCTCTGCTGGACAGATAAGCAGCTATCCTCTAGCTGTGATCAGGACCCAGCAGCAAGCTCAGGCTTTCAGTTCAACTTCACCCACAACTTTTCTTCAGGGATTCACAGGCATCTATGAGAGACATGGAATACGAGGATACTACAATGGGATGGGGGCCAGTTTCGTCCGGGCGATTCCATGCGCTCTGTTAAACTACACCTTGATGAAGAAACTAGACACAATGCTTTCCTGATTTCAGAGTCATGGTTAATTATAATTTGTTGTAGGTTTTTGTGAATGATTTTATGTAATACTCTGTACAAAACAACAACCTTCAAACTTGATGCCATTGTCAATAAACTGTCCCAAAATACTTCAAATTGCAATGAACTACCAAATAGAACTACCAAATATACAACCAAAGGACTGTTGTTGGAGGGCTGATTGGGGC
>TU863314
tagatGCGATGAAATTAAAGCAATTTCCCCCTCAAAAATGAACACTCGGATTATAGTGATATTATTTTCGGATCTCGCAAACAATGCAACATATGTATAGATAGGTCTCTAAGGTGGTTGCAGTCCTATTCCGACCCTTTGTGTTAATGTTTGATATATGCAAATACACCCAGTGTATTTATGCAAATTAGGCATATATCATTTTCTCTATTTTAACACAAGATACAAAAAACAAACCCTGAAACAATtagctaatatatatatatgagtgcatttccccaaaaaacattttttaaattaacaaTAAATTGAATATTGAATTCCCATCAAAATCCCTCTACTCCATTCCTTAGAATCCGTGCCAGTAAAATATTGTATGTGCTATAATTAATTCAAAATCTGATGGATTATACAATTCTAACAGTTTGGACCATCTTCTTCCATTATCCAACTaatgtatttatttgaattgtaaaaaaaaaaaaaacatttttacaaattcgATGACAGTTGCTAATTGGAGCTCGTGGTGGCCCGCCCTATCAAGATGGGTGTTTCTAttgttttggcagttacctgtatgaaCCGTGAATCCGTGGACTGGAGACAGAGGTTAATAATTAAAGAagatattgtgtgtgtatttaggTGTATGGATCCAAGGCGTCCTCCCAGGGATTCAGAGAGCTAAAGGCGGGGGGTGTGAGGTCTATGTGGCAGGGAAACGCTGTGAACGTGCTGAAGGGAACCCCCCAGTCAACTCTGCAGTGCCTCATCTACGCTCAGatgAAGGTGTACACCCAGCGCTGGCAGCAGGAGAGTCTGTCAGTACAGCAGAGGTTTgggctgggctgtgtgtctggggCGGTGGCTCATGCTGTCTTCTATCCTCTAGAGGTACCAGAGCTCTATGACAGGTGCTAAAGGTGAGACTGAACCTATGGGCAGGTACCTACAGCGGGGTGGTGCAGTGTGCCCGCTCCATCTACAGGAATGAGTCTGCTGCATCCTTCTACAGGGGCTTCAGACCCAGTATCCTCTGTATGATTCCCTACGCTGGGGTGGAGTGTGCCGTTCACCAGtCCATTGTGACCTGGGCTAAGACCCAACAGGACTACAGCAGTGACTCCCAGCTCTTCTTTTTCAGTTTTGTGGCCTTCTCTGCTGGACAGATAAGCAGCTATCCTCTAGCTGTGATCAGGACCCAGCAGCAAGCTCAGGCTTTCAGTTCAACTTCACCCACAACTTTTCTTCAGGGATTCACAGGCATCTATGAGAGACATGGAATACGAGGATACTACAATGGGATGGGGGCCAGTTTCGTCCGGGCGATTCCATGCGCTCTGTTAAACTACACCTTGATGAAGAAACTAGACACAATGCTTTCCTGATTTCAGAGTCATGGTTAATTATAATTTGTTGTAGGTTTTTGTGAATGATTTTATGTAATACTCTGTACAAAACAACAACCTTCAAACTTGATGCCATTGTCAATAAACTGTCCCAAAATACTTCAAATTGCAATGAACTACCAAATAGAACTACCAAATATACAACCAAAGGACTGTTGTTGGAGGGCTGATTGGGGCCCAATCTCCAGCCTGACCAATCCTTTGTTAACCCCTATTGTCATTAAATCAGTG

Function

NR:

description
calcium-binding mitochondrial carrier protein SCaMC-1-A-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021614153.2 False 1758 mRNA 0.47 10 89074624 89094403
XM_021614152.2 False 1822 mRNA 0.47 10 89074625 89094403
TU863315 False 593 lncRNA 0.42 2 89079923 89139486
TU863313 False 1589 TUCP 0.42 5 89080565 89094340
TU863314 True 1643 TUCP 0.42 5 89080565 89094394

Neighbor

gene id symbol gene type direction distance location
LOC118965580 NA coding upstream 170790 88886834 ~ 88903834 (+)
LOC110510805 LOC105030507 coding upstream 407304 88646400 ~ 88667320 (+)
LOC110510807 LOC106569716 coding upstream 431862 88625441 ~ 88642762 (+)
acss2l LOC106596660 coding upstream 1014921 88017220 ~ 88059703 (+)
LOC110513441 apcdd1 coding upstream 1299177 87745792 ~ 87775447 (+)
fubp1 LOC106569753 coding downstream 433 89094836 ~ 89113049 (+)
usp33 LOC106569751 coding downstream 54587 89148990 ~ 89223706 (+)
LOC110530860 LOC106569749 coding downstream 130686 89225089 ~ 89291341 (+)
LOC118965581 NA coding downstream 167211 89261614 ~ 89263950 (+)
pigk pigk coding downstream 202549 89296952 ~ 89321553 (+)
G759682 NA non-coding upstream 25847 89048213 ~ 89048777 (+)
G759678 NA non-coding upstream 55858 89018171 ~ 89018766 (+)
G759668 NA non-coding upstream 65633 89008013 ~ 89008991 (+)
G759642 NA non-coding upstream 97646 88975618 ~ 88976978 (+)
G759636 NA non-coding upstream 118861 88955457 ~ 88955763 (+)
G759716 NA non-coding downstream 60613 89155016 ~ 89155613 (+)
G759723 NA non-coding downstream 86272 89180675 ~ 89181326 (+)
G759741 NA non-coding downstream 146056 89240459 ~ 89241436 (+)
G759745 NA non-coding downstream 151922 89246325 ~ 89247348 (+)
G759598 NA other upstream 212796 88861079 ~ 88861828 (+)
G759556 NA other upstream 373205 88697974 ~ 88701419 (+)
G759031 LOC106569827 other upstream 964324 88109006 ~ 88110300 (+)
G759020 LOC106569827 other upstream 967677 88082021 ~ 88106947 (+)
G758988 NA other upstream 1079479 87991970 ~ 87995145 (+)
LOC118965583 LOC106569839 other downstream 473600 89560138 ~ 89659347 (+)
G759892 NA other downstream 602017 89696420 ~ 89696907 (+)
G760623 NA other downstream 1065867 90160270 ~ 90208959 (+)
G760718 NA other downstream 1279684 90362653 ~ 90400472 (+)
LOC110530875 rpl37a other downstream 1605892 90700188 ~ 90709778 (+)

Expression


Co-expression Network