fubp1 (LOC106569753)


Basic Information

Item Value
gene id fubp1
gene name LOC106569753
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 89094836 ~ 89113049 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036986711.1
GAGACTATTTTTTCAACGAGAACGGCCATCTTCTCTCTCCGGGCTTGAGAAGACAAGTGTTACAACAGATATGGCTGACTACTCGAACGTGGCTCCGCCGTCGGGAAATGGCGCCGGAATGAACGACGCTTTTAAAGACGCACTTCAGCGAGCTAGACAGATCGCCGCTAAGATTGGTGGTGACGGCGTTCCCGCAGCGCCCTCGGGTAATGAGTTTGGCTACGGAGGCCAGAAGCGACCCCTAGAAGACGCCGATGACTGTTGGACCAGTCTAAACAGTAGAACCCACCGGGAAGGGATGAACTCTCCTTTCTCAGACCAACCAGAGACCAAGAAGGTGGCACCGAATGACCCGTTCTCAGCAGCGATGGGAAtgggaggaatgggaggtggtggacCACGGTCGTCATCAGAGGAGTTCAAGGTTCCTGACGGGATGGTTGGATTCATtattggaagaggaggagaacagaTATCCCGCATGCAGCAAGAGTCGGGATGCAAAATCCAGATCGCCCCCGACAGTGGAGGAATGCCTGATAGGTCAGTCACACTGACAGGATCTCCAGACTCAATACAAGCTGCCAAGAGGCTGCTGACGGAGATCGTTGATAAGGGTCGTCCTACTCCAGCCTTCCACCACAACGACGCCGGTGGCCCCGGTATGTCTGTCCAGGAGATGCTGGTCCCTGCCTCCAAGGCTGGCCTGGTCATCGGGAAGGGAGGAGAGACCATCAAACAGCTGCAGGAGAGGGCCGGGGTCAAGATGGTGATGATCCAGGAAGGGCCTCAGAACACAGGAGCGGACAAACCTCTACGCATCTCTGGGGAACCTTTTAAAGTCCAGCAAGCCAAAGACATGGTGATGGAGCTGATCAGAGAGCAGGGCTtcagggagcagagaggagagtacGGCTCCAGGATGGGTGGCGgcggaggaggtgagggcctggATGTTCCTGTCCCCAGGTTTGCGGTAGGAATCGTGATCGGGAGAAACGGCGAGATGATCAAGAAGATCCAGAGCGACACAGGAGTCAGGATCCAGTTCAAACCAGaTGACGGCAGTACCCCGGAGAGGATAGCCCAGATCGTGGGTCCTCCTGAACAGTCCCAGCATGCAGCAGAGATAATCTCTGACCTTCTGAGGAGTGTCCAGCAGGGGGGGCCGGGCGGTCCTAACGGAGGGGGCAGGGGCAGAGGCAGGGGGGGTAACGGGGGTGGTAACTGGAACATGGGTCCTCCAGGAGGACTGCAGGAGTTCACCTTCACCGTCCCGACCATGAAGACTGGACTCATCATCGGCAAAGGAGGAGAGACCATCAAGGGCATCAGTCAGCAGTCTGGGGCGCGTATTGAGCTCCAGAGAAATCCTCCCCCCAACTCCGACCCCAACATTAAGATGTTCACCGTCCGAGGATCTCATCAACAGATAGACTACGCACGGCAGCTGGTCGAGGAGAAGATCGGGggtCCAGTCAGTCCAATGGGTGGTCCCCAAGGTCCACCAGGCCCCCACGGAGGTCCGTCTCCCCACGGCCCCCCCGGTCCTCCTGGGCACCCTGCTCAGATGGGCCCCTACAACCCCGGCCCCTACAACCAGGGACCGCCAGGACCACATGGTCCTCCGGCTCCCTACCAGCCTCAGGGTTGGGGCAACGGCTTCCCTCACTGGCAGCAAGGACAGCCTGATCCTGGTAAAGCTGCAGCTGATGCCAACGCAGCGGCCTGGGCAGCGTATTACTCCCAGTACCAGCAGCAACCCCAGGCCCCCATGACGCCCACCGGCGGAGCCCCTGGCACCACACAGGCCAACGGGCAAGGTGACCCCAAGGGACCTGGGCATACTGGGCAGGCCGATTACTCCAAGGCCTGGGAGGAATATTACAACAAAATGGGGCAGCAAAGTCAGCAACCACAGGACTACACCAAGGCCTGGGAGGAGTACTATAAGAAACAAGgtcAAGCGGCCCCTCAGGCGGGAGCAGCACCAGGTGGTCAGCCAGCCGGTCAGCCAGCCGGTCAGCCGGACTACAGTGCTGCCTGGGCAGAATACTACCGTCAGCAGGCTGCTTACTACGGACAGGGCAGCCCACAGGCCATGGGGGCACAGCCACAAGCACCTCAGGGCCAGTAATGTGAAGTGGACATAAAGTAAATGCGACATTGTGGAAAAACAAAAAAACCCTTTTGTTAAATGTGTTGGATGGTGCAGATGCCTTGAAGATCTTAATTTCCCCCCTTTGGTTGGTTTGTTTTCAAGTGTTTCACAATAATGTGATGGCAGCAGTCTACCCGGGAGACACAAACACTTCATCTTTTTGGTTTTTCtacttatttttttttcttctcctccttGTAAATGAACGGTTTTTGGGTTTTTAGTGAGGTAATTTATATGTTCATTCCAGCCCCCATGTATCTTCATGCTATGTGGTTCAAGAGCTCCTGTTATTTAGCTAGTTTACCATGGAAAATCATCTCCGTTTTTAAATCATATGCCTGTTGTGTTTTGCAATAAAACTAAGTGAAACCTCCT
>XM_036986712.1
GAGACTATTTTTTCAACGAGAACGGCCATCTTCTCTCTCCGGGCTTGAGAAGACAAGTGTTACAACAGATATGGCTGACTACTCGAACGTGGCTCCGCCGTCGGGAAATGGCGCCGGAATGAACGACGCTTTTAAAGACGCACTTCAGCGAGCTAGACAGATCGCCGCTAAGATTGGTGGTGACGGCGTTCCCGCAGCGCCCTCGGGTAATGAGTTTGGCTACGGAGGCCAGAAGCGACCCCTAGAAGACGCCGACCAACCAGAGACCAAGAAGGTGGCACCGAATGACCCGTTCTCAGCAGCGATGGGAAtgggaggaatgggaggtggtggacCACGGTCGTCATCAGAGGAGTTCAAGGTTCCTGACGGGATGGTTGGATTCATtattggaagaggaggagaacagaTATCCCGCATGCAGCAAGAGTCGGGATGCAAAATCCAGATCGCCCCCGACAGTGGAGGAATGCCTGATAGGTCAGTCACACTGACAGGATCTCCAGACTCAATACAAGCTGCCAAGAGGCTGCTGACGGAGATCGTTGATAAGGGTCGTCCTACTCCAGCCTTCCACCACAACGACGCCGGTGGCCCCGGTATGTCTGTCCAGGAGATGCTGGTCCCTGCCTCCAAGGCTGGCCTGGTCATCGGGAAGGGAGGAGAGACCATCAAACAGCTGCAGGAGAGGGCCGGGGTCAAGATGGTGATGATCCAGGAAGGGCCTCAGAACACAGGAGCGGACAAACCTCTACGCATCTCTGGGGAACCTTTTAAAGTCCAGCAAGCCAAAGACATGGTGATGGAGCTGATCAGAGAGCAGGGCTtcagggagcagagaggagagtacGGCTCCAGGATGGGTGGCGgcggaggaggtgagggcctggATGTTCCTGTCCCCAGGTTTGCGGTAGGAATCGTGATCGGGAGAAACGGCGAGATGATCAAGAAGATCCAGAGCGACACAGGAGTCAGGATCCAGTTCAAACCAGaTGACGGCAGTACCCCGGAGAGGATAGCCCAGATCGTGGGTCCTCCTGAACAGTCCCAGCATGCAGCAGAGATAATCTCTGACCTTCTGAGGAGTGTCCAGCAGGGGGGGCCGGGCGGTCCTAACGGAGGGGGCAGGGGCAGAGGCAGGGGGGGTAACGGGGGTGGTAACTGGAACATGGGTCCTCCAGGAGGACTGCAGGAGTTCACCTTCACCGTCCCGACCATGAAGACTGGACTCATCATCGGCAAAGGAGGAGAGACCATCAAGGGCATCAGTCAGCAGTCTGGGGCGCGTATTGAGCTCCAGAGAAATCCTCCCCCCAACTCCGACCCCAACATTAAGATGTTCACCGTCCGAGGATCTCATCAACAGATAGACTACGCACGGCAGCTGGTCGAGGAGAAGATCGGGggtCCAGTCAGTCCAATGGGTGGTCCCCAAGGTCCACCAGGCCCCCACGGAGGTCCGTCTCCCCACGGCCCCCCCGGTCCTCCTGGGCACCCTGCTCAGATGGGCCCCTACAACCCCGGCCCCTACAACCAGGGACCGCCAGGACCACATGGTCCTCCGGCTCCCTACCAGCCTCAGGGTTGGGGCAACGGCTTCCCTCACTGGCAGCAAGGACAGCCTGATCCTGGTAAAGCTGCAGCTGATGCCAACGCAGCGGCCTGGGCAGCGTATTACTCCCAGTACCAGCAGCAACCCCAGGCCCCCATGACGCCCACCGGCGGAGCCCCTGGCACCACACAGGCCAACGGGCAAGGTGACCCCAAGGGACCTGGGCATACTGGGCAGGCCGATTACTCCAAGGCCTGGGAGGAATATTACAACAAAATGGGGCAGCAAAGTCAGCAACCACAGGACTACACCAAGGCCTGGGAGGAGTACTATAAGAAACAAGgtcAAGCGGCCCCTCAGGCGGGAGCAGCACCAGGTGGTCAGCCAGCCGGTCAGCCAGCCGGTCAGCCGGACTACAGTGCTGCCTGGGCAGAATACTACCGTCAGCAGGCTGCTTACTACGGACAGGGCAGCCCACAGGCCATGGGGGCACAGCCACAAGCACCTCAGGGCCAGTAATGTGAAGTGGACATAAAGTAAATGCGACATTGTGGAAAAACAAAAAAACCCTTTTGTTAAATGTGTTGGATGGTGCAGATGCCTTGAAGATCTTAATTTCCCCCCTTTGGTTGGTTTGTTTTCAAGTGTTTCACAATAATGTGATGGCAGCAGTCTACCCGGGAGACACAAACACTTCATCTTTTTGGTTTTTCtacttatttttttttcttctcctccttGTAAATGAACGGTTTTTGGGTTTTTAGTGAGGTAATTTATATGTTCATTCCAGCCCCCATGTATCTTCATGCTATGTGGTTCAAGAGCTCCTGTTATTTAGCTAGTTTACCATGGAAAATCATCTCCGTTTTTAAATCATATGCCTGTTGTGTTTTGCAATAAAACTAAGTGAAACCTCCT
>XM_036986713.1
GAGACTATTTTTTCAACGAGAACGGCCATCTTCTCTCTCCGGGCTTGAGAAGACAAGTGTTACAACAGATATGGCTGACTACTCGAACGTGGCTCCGCCGTCGGGAAATGGCGCCGGAATGAACGACGCTTTTAAAGACGCACTTCAGCGAGCTAGACAGATCGCCGCTAAGATTGGTGGTGACGGCGTTCCCGCAGCGCCCTCGGGTAATGAGTTTGGCTACGGAGGCCAGAAGCGACCCCTAGAAGACGCCGATGACTGTTGGACCAGTCTAAACAGTAGAACCCACCGGGAAGGGATGAACTCTCCTTTCTCAGACCAACCAGAGACCAAGAAGGTGGCACCGAATGACCCGTTCTCAGCAGCGATGGGAAtgggaggaatgggaggtggtggacCACGGTCGTCATCAGAGGAGTTCAAGGTTCCTGACGGGATGGTTGGATTCATtattggaagaggaggagaacagaTATCCCGCATGCAGCAAGAGTCGGGATGCAAAATCCAGATCGCCCCCGACAGTGGAGGAATGCCTGATAGGTCAGTCACACTGACAGGATCTCCAGACTCAATACAAGCTGCCAAGAGGCTGCTGACGGAGATCGTTGATAAGGGTCGTCCTACTCCAGCCTTCCACCACAACGACGCCGGTGGCCCCGGTATGTCTGTCCAGGAGATGCTGGTCCCTGCCTCCAAGGCTGGCCTGGTCATCGGGAAGGGAGGAGAGACCATCAAACAGCTGCAGGAGAGGGCCGGGGTCAAGATGGTGATGATCCAGGAAGGGCCTCAGAACACAGGAGCGGACAAACCTCTACGCATCTCTGGGGAACCTTTTAAAGTCCAGCAAGCCAAAGACATGGTGATGGAGCTGATCAGAGAGCAGGGCTtcagggagcagagaggagagtacGGCTCCAGGATGGGTGGCGgcggaggaggtgagggcctggATGTTCCTGTCCCCAGGTTTGCGGTAGGAATCGTGATCGGGAGAAACGGCGAGATGATCAAGAAGATCCAGAGCGACACAGGAGTCAGGATCCAGTTCAAACCAGaTGACGGCAGTACCCCGGAGAGGATAGCCCAGATCGTGGGTCCTCCTGAACAGTCCCAGCATGCAGCAGAGATAATCTCTGACCTTCTGAGGAGTGTCCAGCAGGGGGGGCCGGGCGGTCCTAACGGAGGGGGCAGGGGCAGAGGCAGGGGGGGTAACGGGGGTGGTAACTGGAACATGGGTCCTCCAGGAGGACTGCAGGAGTTCACCTTCACCGTCCCGACCATGAAGACTGGACTCATCATCGGCAAAGGAGGAGAGACCATCAAGGGCATCAGTCAGCAGTCTGGGGCGCGTATTGAGCTCCAGAGAAATCCTCCCCCCAACTCCGACCCCAACATTAAGATGTTCACCGTCCGAGGATCTCATCAACAGATAGACTACGCACGGCAGCTGGTCGAGGAGAAGATCGGGggtCCAGTCAGTCCAATGGGTGGTCCCCAAGGTCCACCAGGCCCCCACGGAGGTCCGTCTCCCCACGGCCCCCCCGGTCCTCCTGGGCACCCTGCTCAGATGGGCCCCTACAACCCCGGCCCCTACAACCAGGGACCGCCAGGACCACATGGTCCTCCGGCTCCCTACCAGCCTCAGGGTTGGGGCAACGGCTTCCCTCACTGGCAGCAAGGACAGCCTGATCCTGGTAAAGCTGCAGCTGATGCCAACGCAGCGGCCTGGGCAGCGTATTACTCCCAGTACCAGCAGCAACCCCAGGCCCCCATGACGCCCACCGGCGGAGCCCCTGGCACCACACAGGCCAACGGGCAAGGGCAGCAAAGTCAGCAACCACAGGACTACACCAAGGCCTGGGAGGAGTACTATAAGAAACAAGgtcAAGCGGCCCCTCAGGCGGGAGCAGCACCAGGTGGTCAGCCAGCCGGTCAGCCAGCCGGTCAGCCGGACTACAGTGCTGCCTGGGCAGAATACTACCGTCAGCAGGCTGCTTACTACGGACAGGGCAGCCCACAGGCCATGGGGGCACAGCCACAAGCACCTCAGGGCCAGTAATGTGAAGTGGACATAAAGTAAATGCGACATTGTGGAAAAACAAAAAAACCCTTTTGTTAAATGTGTTGGATGGTGCAGATGCCTTGAAGATCTTAATTTCCCCCCTTTGGTTGGTTTGTTTTCAAGTGTTTCACAATAATGTGATGGCAGCAGTCTACCCGGGAGACACAAACACTTCATCTTTTTGGTTTTTCtacttatttttttttcttctcctccttGTAAATGAACGGTTTTTGGGTTTTTAGTGAGGTAATTTATATGTTCATTCCAGCCCCCATGTATCTTCATGCTATGTGGTTCAAGAGCTCCTGTTATTTAGCTAGTTTACCATGGAAAATCATCTCCGTTTTTAAATCATATGCCTGTTGTGTTTTGCAATAAAACTAAGTGAAACCTCCT
>XM_036986714.1
GAGACTATTTTTTCAACGAGAACGGCCATCTTCTCTCTCCGGGCTTGAGAAGACAAGTGTTACAACAGATATGGCTGACTACTCGAACGTGGCTCCGCCGTCGGGAAATGGCGCCGGAATGAACGACGCTTTTAAAGACGCACTTCAGCGAGCTAGACAGATCGCCGCTAAGATTGGTGGTGACGGCGTTCCCGCAGCGCCCTCGGGTAATGAGTTTGGCTACGGAGGCCAGAAGCGACCCCTAGAAGACGCCGACCAACCAGAGACCAAGAAGGTGGCACCGAATGACCCGTTCTCAGCAGCGATGGGAAtgggaggaatgggaggtggtggacCACGGTCGTCATCAGAGGAGTTCAAGGTTCCTGACGGGATGGTTGGATTCATtattggaagaggaggagaacagaTATCCCGCATGCAGCAAGAGTCGGGATGCAAAATCCAGATCGCCCCCGACAGTGGAGGAATGCCTGATAGGTCAGTCACACTGACAGGATCTCCAGACTCAATACAAGCTGCCAAGAGGCTGCTGACGGAGATCGTTGATAAGGGTCGTCCTACTCCAGCCTTCCACCACAACGACGCCGGTGGCCCCGGTATGTCTGTCCAGGAGATGCTGGTCCCTGCCTCCAAGGCTGGCCTGGTCATCGGGAAGGGAGGAGAGACCATCAAACAGCTGCAGGAGAGGGCCGGGGTCAAGATGGTGATGATCCAGGAAGGGCCTCAGAACACAGGAGCGGACAAACCTCTACGCATCTCTGGGGAACCTTTTAAAGTCCAGCAAGCCAAAGACATGGTGATGGAGCTGATCAGAGAGCAGGGCTtcagggagcagagaggagagtacGGCTCCAGGATGGGTGGCGgcggaggaggtgagggcctggATGTTCCTGTCCCCAGGTTTGCGGTAGGAATCGTGATCGGGAGAAACGGCGAGATGATCAAGAAGATCCAGAGCGACACAGGAGTCAGGATCCAGTTCAAACCAGaTGACGGCAGTACCCCGGAGAGGATAGCCCAGATCGTGGGTCCTCCTGAACAGTCCCAGCATGCAGCAGAGATAATCTCTGACCTTCTGAGGAGTGTCCAGCAGGGGGGGCCGGGCGGTCCTAACGGAGGGGGCAGGGGCAGAGGCAGGGGGGGTAACGGGGGTGGTAACTGGAACATGGGTCCTCCAGGAGGACTGCAGGAGTTCACCTTCACCGTCCCGACCATGAAGACTGGACTCATCATCGGCAAAGGAGGAGAGACCATCAAGGGCATCAGTCAGCAGTCTGGGGCGCGTATTGAGCTCCAGAGAAATCCTCCCCCCAACTCCGACCCCAACATTAAGATGTTCACCGTCCGAGGATCTCATCAACAGATAGACTACGCACGGCAGCTGGTCGAGGAGAAGATCGGGggtCCAGTCAGTCCAATGGGTGGTCCCCAAGGTCCACCAGGCCCCCACGGAGGTCCGTCTCCCCACGGCCCCCCCGGTCCTCCTGGGCACCCTGCTCAGATGGGCCCCTACAACCCCGGCCCCTACAACCAGGGACCGCCAGGACCACATGGTCCTCCGGCTCCCTACCAGCCTCAGGGTTGGGGCAACGGCTTCCCTCACTGGCAGCAAGGACAGCCTGATCCTGGTAAAGCTGCAGCTGATGCCAACGCAGCGGCCTGGGCAGCGTATTACTCCCAGTACCAGCAGCAACCCCAGGCCCCCATGACGCCCACCGGCGGAGCCCCTGGCACCACACAGGCCAACGGGCAAGGGCAGCAAAGTCAGCAACCACAGGACTACACCAAGGCCTGGGAGGAGTACTATAAGAAACAAGgtcAAGCGGCCCCTCAGGCGGGAGCAGCACCAGGTGGTCAGCCAGCCGGTCAGCCAGCCGGTCAGCCGGACTACAGTGCTGCCTGGGCAGAATACTACCGTCAGCAGGCTGCTTACTACGGACAGGGCAGCCCACAGGCCATGGGGGCACAGCCACAAGCACCTCAGGGCCAGTAATGTGAAGTGGACATAAAGTAAATGCGACATTGTGGAAAAACAAAAAAACCCTTTTGTTAAATGTGTTGGATGGTGCAGATGCCTTGAAGATCTTAATTTCCCCCCTTTGGTTGGTTTGTTTTCAAGTGTTTCACAATAATGTGATGGCAGCAGTCTACCCGGGAGACACAAACACTTCATCTTTTTGGTTTTTCtacttatttttttttcttctcctccttGTAAATGAACGGTTTTTGGGTTTTTAGTGAGGTAATTTATATGTTCATTCCAGCCCCCATGTATCTTCATGCTATGTGGTTCAAGAGCTCCTGTTATTTAGCTAGTTTACCATGGAAAATCATCTCCGTTTTTAAATCATATGCCTGTTGTGTTTTGCAATAAAACTAAGTGAAACCTCCT

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K13210 FUBP; far upstream element-binding protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036986711.1 False 2539 mRNA 0.56 19 89094836 89113049
XM_036986712.1 False 2476 mRNA 0.56 18 89094836 89113049
XM_036986713.1 False 2464 mRNA 0.56 18 89094836 89113049
XM_036986714.1 True 2401 mRNA 0.56 17 89094836 89113049

Neighbor

gene id symbol gene type direction distance location
slc25a24l LOC106569755 coding upstream 433 89074624 ~ 89139486 (+)
LOC118965580 NA coding upstream 191002 88886834 ~ 88903834 (+)
LOC110510805 LOC105030507 coding upstream 427516 88646400 ~ 88667320 (+)
LOC110510807 LOC106569716 coding upstream 452074 88625441 ~ 88642762 (+)
acss2l LOC106596660 coding upstream 1035133 88017220 ~ 88059703 (+)
usp33 LOC106569751 coding downstream 35941 89148990 ~ 89223706 (+)
LOC110530860 LOC106569749 coding downstream 112040 89225089 ~ 89291341 (+)
LOC118965581 NA coding downstream 148565 89261614 ~ 89263950 (+)
pigk pigk coding downstream 183903 89296952 ~ 89321553 (+)
LOC118965583 LOC106569839 coding downstream 447089 89560138 ~ 89659347 (+)
G759682 NA non-coding upstream 46059 89048213 ~ 89048777 (+)
G759678 NA non-coding upstream 76070 89018171 ~ 89018766 (+)
G759668 NA non-coding upstream 85845 89008013 ~ 89008991 (+)
G759642 NA non-coding upstream 117858 88975618 ~ 88976978 (+)
G759636 NA non-coding upstream 139073 88955457 ~ 88955763 (+)
G759716 NA non-coding downstream 41967 89155016 ~ 89155613 (+)
G759723 NA non-coding downstream 67626 89180675 ~ 89181326 (+)
G759741 NA non-coding downstream 127410 89240459 ~ 89241436 (+)
G759745 NA non-coding downstream 133276 89246325 ~ 89247348 (+)
G759598 NA other upstream 233008 88861079 ~ 88861828 (+)
G759556 NA other upstream 393417 88697974 ~ 88701419 (+)
G759031 LOC106569827 other upstream 984536 88109006 ~ 88110300 (+)
G759020 LOC106569827 other upstream 987889 88082021 ~ 88106947 (+)
G759892 NA other downstream 583371 89696420 ~ 89696907 (+)
G760623 NA other downstream 1047221 90160270 ~ 90208959 (+)
G760718 NA other downstream 1261038 90362653 ~ 90400472 (+)
LOC110530875 rpl37a other downstream 1587246 90700188 ~ 90709778 (+)

Expression


Co-expression Network