LOC110530860 (LOC106569749)


Basic Information

Item Value
gene id LOC110530860
gene name LOC106569749
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 89225089 ~ 89291341 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036986720.1
CCAATGTTTGGCTCAGATGTGAGATGGCATTGGGGCACCGGGCCACACACTTTTTTTGGCACTAGCCGTTGTTTGGCCCGTAGACCTACCTACTGTTCTCCCTGCAACAGCAAAAATGTAGTGTTGCATTTTGATGAGCGCCGCCAGTCGTGGAactctgcagcacacacacacacacacacacggtgtgcAGCAAACGATTTGCGGAAGTGAGgtACCCCATTCTGCAGCAGGTGACTGAGCAGCACAATGAGACGTCAGTAGTCCGCCTCCGTAGCATGGCCACGTCACGTTCCTCACGCGTCACAAGGTCATCAGTCGGGCTCAATGGATTGGACGAGAACTTCTGTGGCCGAACCCTCAGGAACCGCAGCATCGCCCAGCCGGAGGAGGTTCAGGGGTCACCGCTCCCCGGCAGCAGGGCTCCCCGCTCCCCCAAGAAGAGACAGGACGCCCAGGCTGGGAGCTCAGAGAAGCCTGGGGGTCACCAGGGAAAGGTAACCCACCACAAGGCCTCCCCAGTGGACAGGGAGACATGGCCGAGCCCCAGGAAGAGGGGACTGTcctgctcagagagagagagtgatgggtgTGGGGGTTTGGACCAGGCTGAGAACtgtgaggggagggggaaggagacgtCGGGGGCTGGTGGGAGAGATGCTTCTCTGCTCCTCAAAAGGGCCAAACGGTGTTCCCGTCACGGGGAGTCGCAGGGCCCCGAGGACGACCCCTCTTCTGCACCCGCCAAACCTGACATCCCCCCATCCTCCTGCACCCCCCCAGCGACTGTCAAGGAGAACAGTGAAGAGGGTGACCCGCTCAACCTAATCTGCACCgcaccctcttcctcttctccacagAACCTCAACAAAGaggaaggtgaggaggaggaggaggaggaggacagcggCGGCCATATTGAGAGCGACGGCCATGCTCAGCAGCCCCTGAACTCCACTTCCCATAATCCCCCTGTTCCGCCCCAGAACTCAAACTCCCATAAATCCTCTACTGGGCTGGGACAGACCAGCAGTAGCTTTGACGCTCAGACAATCCCCCCGGGTGCCAGCGCTGCCATTAACACCAGCTGCCCAGGTCCCAGTCCCGCACTGCTGAACGGCGGCCAGATGGGGGCGCCCTGCCCCTCGCCCCCAGACCCCATAGTGCCTTGTAGAAACTGTGATCCTGtgcaggaggaggaggttagGGACTCTGGGGAGTATTCTGCTCCTCCTCTGGCCTCCTTTGAAGAGGACTCCTCCACCCCACACCTGTCAGTcagggaggaggaagtggagtTGGATGTAGTGGGGGACTCGGTGTGTCAGGAGGAGGAAGTGACAGCGaccgaggaggaggaagaggaagaggaggaggaggagagtaccAACGGGAGAAGTAATGGTTGGCCACTGGTGCAGGATGCTGTTGCCACCAGTATCATCAACGTAAACCACAACATcacaaacaacaacatcaacaactcaGGAGAATCCACCATGCCTTTGCTAGCCCCCCAGACCCACTCAGAGACCCCTTCTGTCTCCGGCACTTCGCCCCCGTCCTTCACCCAACCCCACGAACACCAATACACCCTGAGGACTTCGCCCCGGAGAGCTGGGGCCCCCTCGTCCCCCAAACCCTGCTCCCCTCCCAGAGACCCTCTTCGGGACAACGGCCCTCTGAGAGAGGGGGCCTGTCGGAGGCTGGATCTGGACGCTACTCTGGCTACTTCTACCCCTTCTTCAGGTCCCTCCAGCACCCAGGCCAGGGGAGggtctctcccatctcttctgtCGGTTCCCATGGAGCAGGGAGCCGGTGGGGATGACAAGGACAGGGTAGTAGGGGACGGTCGGGACTACGGGGAGCTCCGAGAAGGCGCCCGGGCAGCCAGTAAGGAGGTTCCGGTAGGAGGAAgccagcagcaggaggaggagaagcaggtGGAGGACGAAGAGGAACCAGATGTGTATTACTTTGAGTCGGACCACCTGGTGCTCAAACACAACAAAGAtTACCAGAGGTTACTCCAGACTGTAGGTGTGTTGGAGGCCCAGAGGACTCAGAGTATACTGGACTTGGAGCGTCTGGCCAGACAGCAGAGAGAAGCTCTCCAAGACCCGGTCAGCTTTGTGGAGCAGCTGCAGAAACAGGTGGAACTGGGCATGCCGCGGCCCCAGAGAGTGGTTCAGCTGCCAGACATCTCATGGGACCAGTACACGTCAGGACTGGGAGACTTCGAGAGGGAGTTCTGTGACAAGAAACGCAAAACCAGGAGGCTCAAACTCATATTCGATAAGGTCAGGTTACCAGACCGACCAATCAGCCCCTTGGATCCCAAGGACAAGGAGGGTGAATCGTCGACCCTGTACTCTGCTCTGCCCTCTAGTGATGCTCTGGAGAACAGCAGCCACTCACAGaTGATCCGAGGGCGGCTGTGTCACCAGAGTAAACCTGACACCTTCAACCAGCTGTGGACCGTGGAAGAACAGaaaaaGCTGGAGCACCTGCTGCTGCAGTTTCCTCCTGAGGAGGTGGAGTCTAAACGCTGGCAGAAGATAGCTGACGCCCTGGGCAACAGGACCGctaaacaggtGGCCAGCCGCGTACAGAAGTACTTCATCAAACTGACCAAAGCAGGAATCCCTGTTCCTGGGAGGACCCCCAACATGTGCATGTACAGCAAGAAGGTGTCCAATAAGAGGCAGCACCACCTGAACAAGCACCTGTACCGACCGTCTACCTTCCTGACGTCATATGAGCCTCCCGTCTTtatggaagaagaggatgagagagcGGCCTACTACAGCTCCCTGCAGGACCCTGATGGAGACGACACGgatgAGGAGGGTGTACCTGTGGAGTTGAGACACCTGCCGGAGTACAAGGAGCTTCTGGAGCTGAAGAGGATGAAGAAACACAAACTGCAGGAGATCCAGGCTGAGAGTAGCATGGCCCTGCACCATGGATACAAGTGTGACGTGTGTGGTGTGGAGCCCATTCAGGGCGTGCGGTGGCATTGTCAGGACTGTCCCTCAGACAACGCTGTGGACTTCTGTTCCAACTGCTCCGACTGCCTGTACAAGACTGAGAGCCACACGCCAGACCACCATCTGGAGCCTGTCCATCACCATGAGACCTTCCTAGACAGGGACTACTGTCTGGCTCAGACCCCTGGATATAACTACCTGGACCCCAACTACTATCCTGCTAACAGATGACGGGAGCCACAGACTGGCCCCTGAACTCCAGCCTATGCCTCAGCCCAGGGGCCATAGTTTTAGTTACACACGAAGGGTCCCTAGCATCCAGGGGCCACAGACACCCAGCCTCAGCCCACACAGCTAGCCTACTACGACAACTAGCCTCCAGATCCCAGGGGCCACAGTCACCCAGCCTCAGCCCACACAGCTAGCCTCAGTCAGCTAGGCTACGACAGCTAGCCTCAGCTAGCCTCCAGATCCCAGAGTTCACAGTTTCAGCTACACCCCAGCGGCCCCTAGCCCCAGACTCAACCTACAGCAGCAACCAACTGGTAGTGTGTGGCTCATGGCGCCATGGCTCATGGCTCTGTCTCTCAGACCCGAATCTAGACGGTTCTCACACCAGCTACTCTGCTCACCCCGCCCTGCTAGCCCAGCAGACTGGCAGGAATCCcattggtggtggtggggggaggtGAAACTGGCTGCCCAGCAGACTCCATTTTGGCTCTAAGAAGAGGTCTGGGACACGCTCACTTCTCTGACTGGTTACCATAACAACCAACAAACTGAACAGAACAGTCTCTGAAAAA
>XM_036986721.1
CTGCAGGCTGGGGCTCAACCGGGGCTCTCGGTCTGTCGGTGCCGTTCCAATCCGCGGATTTGGTTTTAGTCTGTCAGGCCAATTGAATGGAGTGATTTGGTAAAGTAAACTACGTGAGATGAGGACGAAGTAAATACTCCAATGTTTACATTGTGAATTAGTGAAGTTTGATCAAAGAACACCTACCTGCGAACAACTCCACCTTGTACTATCAATCAAGAACGAGgtACCCCATTCTGCAGCAGGTGACTGAGCAGCACAATGAGACGTCAGTAGTCCGCCTCCGTAGCATGGCCACGTCACGTTCCTCACGCGTCACAAGGTCATCAGTCGGGCTCAATGGATTGGACGAGAACTTCTGTGGCCGAACCCTCAGGAACCGCAGCATCGCCCAGCCGGAGGAGGTTCAGGGGTCACCGCTCCCCGGCAGCAGGGCTCCCCGCTCCCCCAAGAAGAGACAGGACGCCCAGGCTGGGAGCTCAGAGAAGCCTGGGGGTCACCAGGGAAAGGTAACCCACCACAAGGCCTCCCCAGTGGACAGGGAGACATGGCCGAGCCCCAGGAAGAGGGGACTGTcctgctcagagagagagagtgatgggtgTGGGGGTTTGGACCAGGCTGAGAACtgtgaggggagggggaaggagacgtCGGGGGCTGGTGGGAGAGATGCTTCTCTGCTCCTCAAAAGGGCCAAACGGTGTTCCCGTCACGGGGAGTCGCAGGGCCCCGAGGACGACCCCTCTTCTGCACCCGCCAAACCTGACATCCCCCCATCCTCCTGCACCCCCCCAGCGACTGTCAAGGAGAACAGTGAAGAGGGTGACCCGCTCAACCTAATCTGCACCgcaccctcttcctcttctccacagAACCTCAACAAAGaggaaggtgaggaggaggaggaggaggaggacagcggCGGCCATATTGAGAGCGACGGCCATGCTCAGCAGCCCCTGAACTCCACTTCCCATAATCCCCCTGTTCCGCCCCAGAACTCAAACTCCCATAAATCCTCTACTGGGCTGGGACAGACCAGCAGTAGCTTTGACGCTCAGACAATCCCCCCGGGTGCCAGCGCTGCCATTAACACCAGCTGCCCAGGTCCCAGTCCCGCACTGCTGAACGGCGGCCAGATGGGGGCGCCCTGCCCCTCGCCCCCAGACCCCATAGTGCCTTGTAGAAACTGTGATCCTGtgcaggaggaggaggttagGGACTCTGGGGAGTATTCTGCTCCTCCTCTGGCCTCCTTTGAAGAGGACTCCTCCACCCCACACCTGTCAGTcagggaggaggaagtggagtTGGATGTAGTGGGGGACTCGGTGTGTCAGGAGGAGGAAGTGACAGCGaccgaggaggaggaagaggaagaggaggaggaggagagtaccAACGGGAGAAGTAATGGTTGGCCACTGGTGCAGGATGCTGTTGCCACCAGTATCATCAACGTAAACCACAACATcacaaacaacaacatcaacaactcaGGAGAATCCACCATGCCTTTGCTAGCCCCCCAGACCCACTCAGAGACCCCTTCTGTCTCCGGCACTTCGCCCCCGTCCTTCACCCAACCCCACGAACACCAATACACCCTGAGGACTTCGCCCCGGAGAGCTGGGGCCCCCTCGTCCCCCAAACCCTGCTCCCCTCCCAGAGACCCTCTTCGGGACAACGGCCCTCTGAGAGAGGGGGCCTGTCGGAGGCTGGATCTGGACGCTACTCTGGCTACTTCTACCCCTTCTTCAGGTCCCTCCAGCACCCAGGCCAGGGGAGggtctctcccatctcttctgtCGGTTCCCATGGAGCAGGGAGCCGGTGGGGATGACAAGGACAGGGTAGTAGGGGACGGTCGGGACTACGGGGAGCTCCGAGAAGGCGCCCGGGCAGCCAGTAAGGAGGTTCCGGTAGGAGGAAgccagcagcaggaggaggagaagcaggtGGAGGACGAAGAGGAACCAGATGTGTATTACTTTGAGTCGGACCACCTGGTGCTCAAACACAACAAAGAtTACCAGAGGTTACTCCAGACTGTAGGTGTGTTGGAGGCCCAGAGGACTCAGAGTATACTGGACTTGGAGCGTCTGGCCAGACAGCAGAGAGAAGCTCTCCAAGACCCGGTCAGCTTTGTGGAGCAGCTGCAGAAACAGGTGGAACTGGGCATGCCGCGGCCCCAGAGAGTGGTTCAGCTGCCAGACATCTCATGGGACCAGTACACGTCAGGACTGGGAGACTTCGAGAGGGAGTTCTGTGACAAGAAACGCAAAACCAGGAGGCTCAAACTCATATTCGATAAGGTCAGGTTACCAGACCGACCAATCAGCCCCTTGGATCCCAAGGACAAGGAGGGTGAATCGTCGACCCTGTACTCTGCTCTGCCCTCTAGTGATGCTCTGGAGAACAGCAGCCACTCACAGaTGATCCGAGGGCGGCTGTGTCACCAGAGTAAACCTGACACCTTCAACCAGCTGTGGACCGTGGAAGAACAGaaaaaGCTGGAGCACCTGCTGCTGCAGTTTCCTCCTGAGGAGGTGGAGTCTAAACGCTGGCAGAAGATAGCTGACGCCCTGGGCAACAGGACCGctaaacaggtGGCCAGCCGCGTACAGAAGTACTTCATCAAACTGACCAAAGCAGGAATCCCTGTTCCTGGGAGGACCCCCAACATGTGCATGTACAGCAAGAAGGTGTCCAATAAGAGGCAGCACCACCTGAACAAGCACCTGTACCGACCGTCTACCTTCCTGACGTCATATGAGCCTCCCGTCTTtatggaagaagaggatgagagagcGGCCTACTACAGCTCCCTGCAGGACCCTGATGGAGACGACACGgatgAGGAGGGTGTACCTGTGGAGTTGAGACACCTGCCGGAGTACAAGGAGCTTCTGGAGCTGAAGAGGATGAAGAAACACAAACTGCAGGAGATCCAGGCTGAGAGTAGCATGGCCCTGCACCATGGATACAAGTGTGACGTGTGTGGTGTGGAGCCCATTCAGGGCGTGCGGTGGCATTGTCAGGACTGTCCCTCAGACAACGCTGTGGACTTCTGTTCCAACTGCTCCGACTGCCTGTACAAGACTGAGAGCCACACGCCAGACCACCATCTGGAGCCTGTCCATCACCATGAGACCTTCCTAGACAGGGACTACTGTCTGGCTCAGACCCCTGGATATAACTACCTGGACCCCAACTACTATCCTGCTAACAGATGACGGGAGCCACAGACTGGCCCCTGAACTCCAGCCTATGCCTCAGCCCAGGGGCCATAGTTTTAGTTACACACGAAGGGTCCCTAGCATCCAGGGGCCACAGACACCCAGCCTCAGCCCACACAGCTAGCCTACTACGACAACTAGCCTCCAGATCCCAGGGGCCACAGTCACCCAGCCTCAGCCCACACAGCTAGCCTCAGTCAGCTAGGCTACGACAGCTAGCCTCAGCTAGCCTCCAGATCCCAGAGTTCACAGTTTCAGCTACACCCCAGCGGCCCCTAGCCCCAGACTCAACCTACAGCAGCAACCAACTGGTAGTGTGTGGCTCATGGCGCCATGGCTCATGGCTCTGTCTCTCAGACCCGAATCTAGACGGTTCTCACACCAGCTACTCTGCTCACCCCGCCCTGCTAGCCCAGCAGACTGGCAGGAATCCcattggtggtggtggggggaggtGAAACTGGCTGCCCAGCAGACTCCATTTTGGCTCTAAGAAGAGGTCTGGGACACGCTCACTTCTCTGACTGGTTACCATAACAACCAACAAACTGAACAGAACAGTCTCTGAAAAA

Function

NR:

description
LOW QUALITY PROTEIN: ZZ-type zinc finger-containing protein 3-like

GO: NA

KEGG:

id description
K24536 ZZZ3; ZZ-type zinc finger-containing protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036986720.1 False 3802 mRNA 0.58 12 89225089 89291341
XM_036986721.1 True 3814 mRNA 0.58 12 89226127 89291341

Neighbor

gene id symbol gene type direction distance location
usp33 LOC106569751 coding upstream 1383 89148990 ~ 89223706 (+)
fubp1 LOC106569753 coding upstream 112040 89094836 ~ 89113049 (+)
slc25a24l LOC106569755 coding upstream 130686 89074624 ~ 89139486 (+)
LOC118965580 NA coding upstream 321255 88886834 ~ 88903834 (+)
LOC110510805 LOC105030507 coding upstream 557769 88646400 ~ 88667320 (+)
pigk pigk coding downstream 5611 89296952 ~ 89321553 (+)
LOC118965583 LOC106569839 coding downstream 268797 89560138 ~ 89659347 (+)
yipf1 yipf1 coding downstream 499569 89790910 ~ 89837790 (+)
zgc:113691 LOC106569840 coding downstream 562125 89853466 ~ 89854375 (+)
ndc1 ndc1 coding downstream 570480 89861821 ~ 89911594 (+)
G759723 NA non-coding upstream 43763 89180675 ~ 89181326 (+)
G759716 NA non-coding upstream 69476 89155016 ~ 89155613 (+)
G759680 NA non-coding upstream 87158 89042687 ~ 89137931 (+)
G759755 NA non-coding downstream 7038 89298379 ~ 89300155 (+)
G759759 NA non-coding downstream 28480 89319821 ~ 89652495 (+)
G759765 NA non-coding downstream 44666 89336007 ~ 89337833 (+)
G759772 NA non-coding downstream 61366 89352707 ~ 89354993 (+)
G759785 NA non-coding downstream 93119 89384460 ~ 89384998 (+)
G759598 NA other upstream 363261 88861079 ~ 88861828 (+)
G759556 NA other upstream 523670 88697974 ~ 88701419 (+)
G759031 LOC106569827 other upstream 1114789 88109006 ~ 88110300 (+)
G759020 LOC106569827 other upstream 1118142 88082021 ~ 88106947 (+)
G759892 NA other downstream 405079 89696420 ~ 89696907 (+)
G760623 NA other downstream 868929 90160270 ~ 90208959 (+)
G760718 NA other downstream 1082746 90362653 ~ 90400472 (+)
LOC110530875 rpl37a other downstream 1408954 90700188 ~ 90709778 (+)

Expression


Co-expression Network