LOC118965585


Basic Information

Item Value
gene id LOC118965585
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 89605947 ~ 89607379 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005053002.1
ttcagtaccgcttgccatgcggtagtagagagaacagtctatggctggggtctttgacaatttttagggcaaaTATGGATTGACCAACCTCAGGTGGAAGGTTGGCCTACCTCAGGTGGAAGGTTGGCCTACCTCAGGTGGAAGGTTGCCCCTGACTGAGGTGGAAGGCTGCCCCTGACTGAGGTGGAAGGTTGCCCCTGACTGAGGTGGAAGGTTGCCCTTCCACACTCTGACAAGAACAACTTAGACAATCCTGACTACTACACAGGGTGCGGCTTAGGGGCCGGTAGGTCTGGCGGTGAGGGGCCGGTAGGTCTGGCGGTGAGGGGCCGGTAGGTCTGGCGGTGAGGGGCCGGTGTCGGCCTTATCATATTAAAATAAAAGTGATTTTAAAAATTCTCAATTTACAATTACATTCAGCATCAAATGGTGGATGATATAGGTTCTCAgaactgtaatgaatgactatTATAATAGGATTGAACTGTAATGAGTGACTATAATAATAGGATTGAACTGTAATGAGTGACTATAATAATAGGATTGAACTGTAATGAGTGACTATAATAATAGGATTGAACTGTAATGAGTGACTATAATAATAGGATTGAACTGTAATGAGTGACTATAATAATAAGATTGAACTGTAATGAGTGACTATAATAATAAGATTGAACTGTAATGAGTGACTATAATAATAGGATTgaactgtaatgaatgactaaTTATAATAATAGGACTGAACTGTAATGAGTGACTATAATAATAAGATTGAACTGTAATGAGTGACTATAATAATAAGATTGAACTGTAATGAGTGACTATAATAATAGGATTgaactgtaatgaatgactaaTTATAATAATAGGACTGAACTGTAATGAGTGACTATAATAATAGGATTGAACTGTAATGAGTGACTATAATAATAGGATTGAACTGTAATGAGTGACTATAATAATAAGATTGAACTGTAATGAGTGACTATAATAATAGGATTGAACTGTAATGAGTGACTATAATAATAGTATGGAACTGTAATGAGTGACTATAATAATAGGATTGAACTGTAATGAGTGACTATAATAATAGGATTGAACTGTAATGAGTGACTATAATAATAGGATTGAACTGTAATGAGTGACTATAATAATAGGATTGAACTGTAATGAGTGACTATAATAATAAGATTgaactgtaatgaatgactat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005053002.1 True 1213 mRNA 0.36 2 89605947 89607379

Neighbor

gene id symbol gene type direction distance location
LOC118965584 LOC106592566 coding downstream 7330 89589339 ~ 89598617 (-)
LOC118965582 st6galnac5 coding downstream 197905 89352710 ~ 89408042 (-)
miga1 miga1 coding downstream 457252 89126468 ~ 89148695 (-)
LOC110530869 LOC106569754 coding downstream 532775 89065258 ~ 89073172 (-)
LOC110530871 dnajb4 coding downstream 545444 88991233 ~ 89060503 (-)
LOC110530891 LOC106925954 coding upstream 30264 89637643 ~ 89707054 (-)
LOC110530894 LOC106569835 coding upstream 116355 89723665 ~ 89770006 (-)
LOC110530892 LOC106569833 coding upstream 166236 89773615 ~ 89791699 (-)
LOC118965586 NA coding upstream 193083 89800462 ~ 89803937 (-)
LOC118965587 NA coding upstream 201927 89809305 ~ 89814256 (-)
G760394 NA non-coding downstream 1511 89589347 ~ 89604436 (-)
G760389 NA non-coding downstream 19512 89584118 ~ 89586435 (-)
G760358 NA non-coding downstream 68155 89537233 ~ 89537792 (-)
G760354 NA non-coding downstream 109942 89458709 ~ 89496005 (-)
G760352 NA non-coding downstream 110774 89461567 ~ 89495173 (-)
G760414 NA non-coding upstream 60138 89667517 ~ 89667892 (-)
G760417 NA non-coding upstream 73229 89680608 ~ 89682198 (-)
G760424 NA non-coding upstream 84366 89691745 ~ 89692343 (-)
G760426 NA non-coding upstream 89306 89696685 ~ 89697080 (-)
G760431 NA non-coding upstream 114176 89721555 ~ 89721903 (-)
G760362 NA other downstream 70594 89534623 ~ 89535353 (-)
G760306 NA other downstream 273171 89331281 ~ 89332776 (-)
G760192 LOC106569753 other downstream 503565 89099844 ~ 89102382 (-)
G760182 LOC106569755 other downstream 524602 89079298 ~ 89081345 (-)
G760971 NA other upstream 733433 90340812 ~ 90341303 (-)
G761034 NA other upstream 1043017 90635679 ~ 90652740 (-)
G761176 NA other upstream 1188768 90796147 ~ 90797574 (-)
G761467 NA other upstream 1339100 90946479 ~ 90948106 (-)
G761504 NA other upstream 1448368 91055747 ~ 91111937 (-)

Expression


Co-expression Network