LOC118965662


Basic Information

Item Value
gene id LOC118965662
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 89952232 ~ 89952338 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005053040.1
GGTGTGGATGATTACAAATTGACCATAGGTAGGTCTGTTTTGACCGTTTTGGTTAAAGTTTTAGGACCTACCAATGACCCGGACTGTCATAGTTACACTGACACACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005053040.1 True 107 mRNA 0.43 1 89952232 89952338

Neighbor

gene id symbol gene type direction distance location
hectd3 hectd3 coding upstream 4589 89932208 ~ 89947643 (+)
best4 LOC106569841 coding upstream 20158 89917042 ~ 89932074 (+)
ndc1 ndc1 coding upstream 40638 89861821 ~ 89911594 (+)
zgc:113691 LOC106569840 coding upstream 97857 89853466 ~ 89854375 (+)
yipf1 yipf1 coding upstream 114442 89790910 ~ 89837790 (+)
LOC118965661 NA coding downstream 278 89952616 ~ 89952684 (+)
acadm acadm coding downstream 15171 89967509 ~ 89974264 (+)
rabggtb rabggtb coding downstream 23194 89975532 ~ 89991005 (+)
st6galnac3 LOC106591001 coding downstream 78686 90031024 ~ 90108312 (+)
LOC110515626 LOC108444490 coding downstream 276323 90228661 ~ 90295350 (+)
G760503 NA non-coding upstream 2595 89949135 ~ 89949637 (+)
G760498 NA non-coding upstream 27832 89923060 ~ 89924400 (+)
G760491 NA non-coding upstream 37063 89914970 ~ 89915169 (+)
G759979 NA non-coding upstream 39928 89911869 ~ 89912304 (+)
G759970 NA non-coding upstream 94492 89857459 ~ 89857740 (+)
G760511 NA non-coding downstream 27252 89979590 ~ 89980502 (+)
G760513 NA non-coding downstream 42136 89994474 ~ 89994710 (+)
G760515 NA non-coding downstream 45609 89997947 ~ 89998361 (+)
G760516 NA non-coding downstream 46142 89998480 ~ 89998878 (+)
G760517 NA non-coding downstream 46596 89998934 ~ 89999607 (+)
G759892 NA other upstream 255325 89696420 ~ 89696907 (+)
LOC118965583 LOC106569839 other upstream 292885 89560138 ~ 89659347 (+)
slc25a24l LOC106569755 other upstream 857838 89074624 ~ 89139486 (+)
G759598 NA other upstream 1090404 88861079 ~ 88861828 (+)
G759556 NA other upstream 1250813 88697974 ~ 88701419 (+)
G760623 NA other downstream 207932 90160270 ~ 90208959 (+)
G760718 NA other downstream 421749 90362653 ~ 90400472 (+)
LOC110530875 rpl37a other downstream 747957 90700188 ~ 90709778 (+)
ndufb3 ndufb3 other downstream 784953 90737231 ~ 90743084 (+)
G760857 NA other downstream 817779 90770117 ~ 90771037 (+)

Expression


Co-expression Network