LOC110531063 (LOC106591048)


Basic Information

Item Value
gene id LOC110531063
gene name LOC106591048
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 90301067 ~ 90364204 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036986768.1
TCTGTATagatataactatatacagtCATTGATATATAGCCTAGGCTACATGAGGAGAGGAAAAACAACAATGTAAACGTCGCTCTTAAACCGGAATGCTTCTGAACAGGGTTAGGCTACTTAAGGCGGCGCTGTAGAATGAGGAAGTTCCTACGGTATGATAGTGGTTTCTTCAAGCATGCTTCTTTCTCCACGTCCGTTCTCTGTCAGATGCCAGAATCGACACACTGAAGCGGTCTGTTGACGGGACAATAAACAGCTTCTTCGCCTGTGGCATAGCAGTCTATCGTGGACCGAGATCATTTCATTTCGCTATGGGGGCATCTTCTTCCAGTCTGCTGGATGAGACTAAATCCAACTACATCAGAGgtcgTGCGGAGTCCGAGCTGAAGAACTTCAGTCCCCACTACAGGCAGCAGTACTTTGTGGCCTTCTTCTCTCAGCTGCAGGAGGAGGTGGAGcaacacaaagagacacacactcaGCTCCTTAAACAGAGGGAGCCCCTTAGGCCAGAGGAAGTTTTGTATCAGGACAGTGTTCTGCACTATGACGACACCGGAAAGTGGAAGGAGAGGTTTGTTGTGATGAGAGCCAATCACAGCCTGGAGTGTCATGACAACCAGGAGAGCTTCAGTAAAGGTGTTCCGGCCAGACAGAGACTCCTGCCAACAGGGGGCGTAGTTCTGACATCAGAGGAGAAGTACACAGCGCTGGTGGACAAGGCCTTCCCTGACCCTAAATGTTTGAAGGAGGAGACATCTCCCCCCATGGTAGTGGTACCTTCCGGTCAGTTCCCTGTCTACCTCAGACTGCCCTACAGACGTGACGTGTACTTTAGCTTCCCCCAGGAGGACCGACGAGCGACCTTCCTCTCCATCCTCACGGGCTGCATCAGGCACCAGAACCACGaTTCTCTGAGGAGGTCTTCCTGTGAGTGTCAGGCGTTCCTCAAGGCCATACATTTCTACCGTCAGGAGAAAGGACACTATGAGTCCTGGGACATGCTGGTGGGCTGTGAGGAGCAGGTCCTCGCCAATCTGGTTTTGGAGGAGCTACAACCCTCTCTACAGACAGAACTGCTGGCCAGACTAAAGGGAAAGAaagcagggaggaagagagtctgGTTCACCACGTTGGAAGCCGCGTACCACCTGGTCCAGGATCAGCTGAGGGAGGGTCTGAAGGGACTGAAGGAGGAGTGTAAAGAGACAGCCAGGTCTCATGAAGCTCTGCTTCGCTCTGATATGGACCAGATAGCCAGTTCTAGAACCTTCCTGCAGGCCAAGCTACAAGCCTCCGTCAGTGATCCAGCAGCAAAGTTCTGCAGTGAGAACGTGTCTCCGTACCTGGCGTCCATCTTGGAAGAGCTGATGTCTCCGGTGACGGGGGGCTTCCAGGGGGTCCGGCTTCTCCTGGAGGGGGAGATAAACACTCTCTGTCTGGGCTTCCCCGAGGGCGCGGGGCAGGAGGAGTTAAACCAGgcACTGGGTCAGATGTGTCAGGCAAGTCTGGAAGAGTGTTACCAGAAAGTGGAGGTCCTGACAGAACAGCTTCAGGAACTCAGGCATCGCTTCAAGTTCTCCAACTCAGTTCGTCTGATCCACTGCACGCAGATAGACATGCAACAGcTGATAGAGAATGCCGTGTACACCTTTAAATTGCTCCTCCAGAGCTCACTGAAAGACAACCCTTCCAAACTCACCTCAGCCATGGAGAAAGCAAAGCTCAGAGTCCTCAAGCAATATGACCATGACAGTAGCACGGTGAGGAAGAGGATCTTTCAGGAGGCTCTGGTTGACATCACGCTTCCTGCTATCAGGAGGAACCTGGCTCCGGCACACAAACCGgaCCTGCAGAAGTTAGACCAGTACATCTTTGCGGATTACACCAACTTCATCAAAGTGGAAAACGTTTATGAAGATATTCTACTGAACATTCTGACCATCGAGGTGGACAAAGTGGTGAAAGAAGCTGCCAGTCTGAGGAAGAACAACTTGATGGTGGACAGTACTGACCTGCAGAGTGCCAGCCAGAGCAGCCTAACAGACAGTCGAACCCCTCCCCTCTCCGCCCCCGCCAGCCCTGCCAAGATGGCTGTCTCTGGGCTGAGCAGACAGGCCGAGCGGGCATCTTCTCCCCTGGTGCAGAACTTGTCTTCTAGCGCTGGGAGGCTGGAGGTGGAAGGTGGCCCAGTGGTCCCAGATATGGCTGCCCTCACTCCTCCTGTCATTGTCATAACTCCACAAAGTGAGgctccagacccagacccagcccCACTCTCACTCCCAGCCCCAGCACATATACTTACCTATACTGCTGATGTCTCTGTAGCAGAGCCTGATACCCCTTCACCTCTACCTGATACCCCTTCCCCTCTACCTGATACCCCTTCACCTCTACCTGAAATGTCCTCTGCTGAAAGTGATTACCCTTCTGGTGCTGCCTCAACCAAACCTGATGCTTCCTTAGTCAATCATGACGCCCCTTTGGCCACAATCACACCTTATGCCGCCTCCCCCCAGCCTCCTCTTCCTGTGGCTGAACCAGCTCCCCAGACACCGGAAGTTACAGACACAGCCAAAGCATCCCAACCACCAGGAACTGAAGACAAACCAGACACAGACAAAGCCAGAAACAGCCCAGTGAGTgacagtgtgttggtgtgtgtcgaGGCTCTGTCAGCAGTGAGTATGATTCTTCCTGAGGCCACGGTGCTCTCCACtgatcagagacagagacaagccACAGACAGAGCAGTCTACCTGAAAACTCCTGCAGGGGTGAAGGAGGGGGCATCTGTACCTCTCACTGTGGacgagaaggaagaggaggaagaacatCTTTGTAAGGAGGCAGAAGCACATCACATTGGTACAGCCCCATCCAACGCCCATATAGAAACTGTAGACAGTGATTTGGTCCACTCTGACACCCCTCGAGAAATGAAAGCTAGTGGTACAGTCCAAACTAGCTCATCTACCCAAGCCAGAGACACTGAACCAGCCTGCCCGACTCAGAATGACCCTAACTCCACTGAACCAGCCTCCCAGACTCAGAATGACCCTAACCCCACTAAACCAGCCTCCCAGACTCAGATTGACCTTAACCCCACAGGATCAGAGATGCAGCCTGGAGGCAGTGAGGACAGAGCTGCAGTTACCTCCGTCACTAGAGTTACTGTCACTGAGAGCGAGGGTGCCCTGCTTGCATGCAATACCCTGGTCACATCACGAGGGGGTGCTACTACTACACTCACTGGGCCTGGGGAGGGTGTAGTGGAGgcaggggatagaggagaggctctggggggtgtagtggaggcaggggacagaggagaggctcTGGGGGGTGTAGCGGAggcaggggacagaggagaggctctggggggtgtagtggaggcaggagacagaggagaggctctggggggtgtagaggaggcagaggacagaggagaggctcTGGGGGGTGTAGTGGAGGCTCTGGGGCTACAGTCTAACAcagtggggatggagggagaggaggaagcggTTCCATTGGGTAGTGTGCAGTCCATCCGTGACTTGGTGATGGAGGTAGTGGAGGTGGAAGAGCTGATACAGAGGTGTCCCCCAGAAAACAGCACTCCCTAGCTGGGGAAAGAACgactagggggggggggtgtaccaaCAGCAGAGCAATTAACGGTGTTCATTTTGAACCCAATTCAAAATCTATTAACTATTTCTATGTCAAATAAATGACTGAAAATGTTTACTCTACAGACTGATAGAAATTGAGGAGGtaatcatctctctcctccctcctcagaGGAGCAACCACAGACTGGAGAAGAAAGAAACTGACCAAATAACATAAACGTTAACATCTGATAGCTATACTAACAAGGACTGCTATTGGTGCAGCAGACGATAATACAACTTTCACTTACATACTCAATTTTATATTGAACAACTTTGCTTTATTTGTTGTTGAAATAATTGTCATCTTTTTCatattttggggggggttgaAATGAGCACCTTACATTTTGATCTGTTGTGCAGTTGGTTTTACCGTGACAACAGAAGTAATGCATTTCTAAGCCATTTGGCTTTGTTCTGTAGGACCTTTTGGGACAAAGCTATTTAGATCTGAATATATTTAACAGTTATaagaatcaaatcacattttatttgtcacatacacattaaAATAATGATAAGGGAGGTGCTTAAATTAATAAAAACATAACACTTAA

Function

NR:

description
protein Niban-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036986768.1 True 4240 mRNA 0.51 14 90301067 90364204
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118965587 NA coding downstream 486811 89809305 ~ 89814256 (-)
LOC118965586 NA coding downstream 497130 89800462 ~ 89803937 (-)
LOC110530892 LOC106569833 coding downstream 509368 89773615 ~ 89791699 (-)
LOC110530894 LOC106569835 coding downstream 531061 89723665 ~ 89770006 (-)
LOC110530891 LOC106925954 coding downstream 594013 89637643 ~ 89707054 (-)
orc2 orc2 coding upstream 313037 90677241 ~ 90694420 (-)
LOC110530878 LOC106569723 coding upstream 397155 90761359 ~ 90779222 (-)
bag1 LOC106569734 coding upstream 588788 90952992 ~ 90972453 (-)
LOC110512221 chmp5 coding upstream 620378 90984582 ~ 91010533 (-)
oprk1 LOC105007147 coding upstream 681836 91046040 ~ 91058874 (-)
G760947 NA non-coding downstream 12314 90288046 ~ 90288753 (-)
G760949 NA non-coding downstream 15960 90284371 ~ 90285107 (-)
G760927 NA non-coding downstream 43612 90256053 ~ 90257455 (-)
G760915 NA non-coding downstream 55233 90242399 ~ 90245834 (-)
G760916 NA non-coding downstream 56610 90243204 ~ 90244457 (-)
G760987 NA non-coding upstream 7390 90371594 ~ 90372807 (-)
G760990 NA non-coding upstream 16294 90380498 ~ 90380812 (-)
G760995 NA non-coding upstream 37770 90401974 ~ 90403783 (-)
G761048 NA non-coding upstream 127456 90491660 ~ 90504235 (-)
G761061 NA non-coding upstream 154243 90518447 ~ 90519380 (-)
G760362 NA other downstream 765714 89534623 ~ 89535353 (-)
LOC118965582 st6galnac5 other downstream 893565 89352710 ~ 89408042 (-)
G760306 NA other downstream 968291 89331281 ~ 89332776 (-)
G760192 LOC106569753 other downstream 1198685 89099844 ~ 89102382 (-)
G760182 LOC106569755 other downstream 1219722 89079298 ~ 89081345 (-)
G761034 NA other upstream 286192 90635679 ~ 90652740 (-)
G761176 NA other upstream 431943 90796147 ~ 90797574 (-)
G761467 NA other upstream 582275 90946479 ~ 90948106 (-)
G761504 NA other upstream 691543 91055747 ~ 91111937 (-)
G761604 NA other upstream 896875 91261079 ~ 91272370 (-)

Expression

LOC110531063(LOC106591048) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 30.
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LOC110531063(LOC106591048) Expression in each Bioproject

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LOC110531063(LOC106591048) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
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Co-expression Network