LOC110530875 (rpl37a)


Basic Information

Item Value
gene id LOC110530875
gene name rpl37a
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 90700188 ~ 90709778 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021614166.2
GAACGCAACCTCTTGCAGTGGAAGCGTTGCTGAGGGGGGAAGAGGCAACAGCGCCAACATCCCACAATGCAATACATTCCACAGGGGTAAATTGCGCCTGCGTACTGTGCGCTTCCTTTTTGGACCTACGTCTCCAGAACTACAATGGCCAAGCGCACCAAGAAGGTGGGGATTGTGGGTAAATACGGCACGCGTTACGGCGCGTCGCTCAGGAAGATGGTGAAAAAGATTGAGATCAGCCAGCACGCCAAGTACACCTGCTCCTTCTGTGGCAAGACTAAGATGAAGAGGAGGGCAGTTGGTATCTGGCACTGTGGATCCTGCATGAAGACTGTTGCTGGAGGCGCCTGGACATACAACACGACGTCTGCAGTCACCGTGAAGTCGgccatcaggagactgaaggagCTGAAAGACCAGTAGACTGTTACCGGAGAATCAAGACTGTCACTTTTTTGCACAGTTTGACCTGGACGCTGTGGCGAACATCTACCACAATAAAAAGCAGTCTGGAGCACCAGAGTCTACTTGTACTACTTGTGTTGCTGTTAGTACAGCCCTGTGTGTTGCCTGCCACCTGAGTGTCTGAATGTTACTTGGCGCTGATGTTAACTCCTACAGTCCCACTTCTAGCCtcttt
>TU864957
TGCGCTTCCTTTTTGGACCTACGTCTCCAGAACTACAATGGCCAAGCGCACCAAGAAGGTGGGGATTGTGGGTAAATACGGCACGCGTTACGGCGCGTCGCTCAGGAAGATGGTGAAAAAGATTGAGATCAGCCAGCACGCCAAGTACACCTGCTCCTTCTGTGGCAAGACTAAGATGAAGAGGAGGGCAGTTGGTATCTGGCACTGTGGATCCTGCATGAAGACTGTTGCTGGAGGCGCCTGGACATACAACACGACGTCTGCAGTCACCGTGAAGTCGgccatcaggagactgaaggagCTGAAAGACCAGTAGACTGTTACCGGAGAATCAAGACTGTCACTTTTTTGCACAGTTTGACCTGGACGCTGTGGCGAACATCTACCACAATAAAAAGCAGTCTGGA

Function

symbol description
rpl37a A structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Located in cytosolic ribosome. Part of cytosolic large ribosomal subunit.

NR:

description
PREDICTED: 60S ribosomal protein L37a

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021614166.2 False 640 mRNA 0.52 4 90700188 90709778
TU864957 True 407 TUCP 0.52 4 90700295 90709652

Neighbor

gene id symbol gene type direction distance location
zgc:162816 LOC106569720 coding upstream 25324 90658311 ~ 90674864 (+)
LOC110531056 LOC106591834 coding upstream 47483 90591990 ~ 90652705 (+)
LOC110517228 LOC106597294 coding upstream 154930 90439800 ~ 90545258 (+)
LOC118965588 NA coding upstream 299715 90398599 ~ 90400473 (+)
LOC110530899 LOC106569745 coding upstream 302625 90374071 ~ 90397563 (+)
pecr pecr coding downstream 11369 90721147 ~ 90736113 (+)
ndufb3 ndufb3 coding downstream 27453 90737231 ~ 90743084 (+)
LOC110530867 LOC106569722 coding downstream 69345 90779123 ~ 90796938 (+)
LOC110530865 LOC106595329 coding downstream 90210 90799988 ~ 90830525 (+)
LOC110530903 LOC106569743 coding downstream 203995 90913773 ~ 90916737 (+)
G760844 NA non-coding upstream 7144 90692425 ~ 90693044 (+)
G760837 NA non-coding upstream 38675 90661231 ~ 90661513 (+)
G760832 NA non-coding upstream 42070 90657807 ~ 90658118 (+)
G760817 NA non-coding upstream 100404 90599041 ~ 90599784 (+)
G760802 NA non-coding upstream 114536 90585116 ~ 90585652 (+)
G760871 NA non-coding downstream 18751 90728529 ~ 90729541 (+)
G760872 NA non-coding downstream 21212 90730990 ~ 90732388 (+)
G760886 NA non-coding downstream 95362 90805140 ~ 90805628 (+)
G760887 NA non-coding downstream 95852 90805630 ~ 90862789 (+)
G760892 NA non-coding downstream 108897 90818675 ~ 90824470 (+)
G760718 NA other upstream 299716 90362653 ~ 90400472 (+)
G760623 NA other upstream 491229 90160270 ~ 90208959 (+)
G759892 NA other upstream 1003281 89696420 ~ 89696907 (+)
LOC118965583 LOC106569839 other upstream 1040841 89560138 ~ 89659347 (+)
slc25a24l LOC106569755 other upstream 1605794 89074624 ~ 89139486 (+)
G760857 NA other downstream 60339 90770117 ~ 90771037 (+)
G761244 LOC106569734 other downstream 243214 90952992 ~ 90972563 (+)
G761280 NA other downstream 309760 91007569 ~ 91040568 (+)
G761291 NA other downstream 391541 91101319 ~ 91104154 (+)

Expression


Co-expression Network