pecr (pecr)


Basic Information

Item Value
gene id pecr
gene name pecr
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 90721147 ~ 90736113 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036986785.1
GGCGCTCAAAAACACGACAGATCACATGACTAGCACCGAGAAGCAGGGAGAAACATGGCCGTCTCCGGTGTGTTTAAAGCGGGTCTGTTCAACCACAAAGTGGCGGTGGTAACGGGAGGAGGCACCGGAATCGGTAAAGCCATCTCCTCCGACCTGCTGAAGCTGGGTTGTAACGTGGTGATCTCCAGTAGGAAGTTGGAGAGGCTGGAGGCTGCAGCTGAAGAGCTGAGACAGAGTATCCCTGAGTCTAGTCCTGCATCTGTCACCCCTATAGTCTGTAACATACGCAACGAGGAGGAGGTGAAGTCTCTGGTGGGGTCAGTGTTGCAGCAGTATGGTCGGATAGACTACCTGGTAAATAACGGTGGAGGTCAGTTCAGCAGCCCAGCAGAACACACCTCATCTAAGGGGTGGAAGGCTGTCATAGACACCAACCTCACAGGAACCTTCCACTGCTGCAAGGaagTGTATGCTGCATGGATGAAGGAGAACGGAGGAGTGATCGTCAACATCATCGCTGATATGTGGAAGGGCTTCCCAGGCATGGCTCATACCGGAGCAGCGCGGGCCGCTGTAGACAACCTAACTAAGACTCTGGCCATCGAATGGGCCGTGTCTGGAGTCAGAGTCAACGCCATAGCACCgGGTACCATCATCTCCAAGACAGCCGTTGAGAACTATAAGGAGTTTGGACCAACACTGTTTAAGATGTCTATTCCCTTCAGCCCTGCTAAAAGACTGGGAGTCCCAGAGGAGatctctCCAGCAGTGTGCTTCCTCCTGTCTCCTGGTGCCTCTTATATCTCTGGAGCCACTCTGAGggtggacgctggacagagtctTTACCACTCTATGTGGGAAATACcagATCACAGTGCGTGGCCTGCGGCCCCAGAGGGAGAGAATCTGGACACTCTGAAAGAGCTGCTGAAACCCAAGGCCAGGCTCTAACTATCACTACGGAAACAAGGTCATCGCTACGGAAACAACCCAGCACCGCGGTGACCAGCCCATGGCAACGGATGGACGGACGGGTGTATGattgtagacagacagtagatgtTTAGAGAATTGTTTTTGATAACGCTGATCAGAATGCTATCAATAtgaattaatggaaggattagtGTCACTATAGAGGCTGACCTCTACATCTGTCTCCTCTCGTCCTGTCAGCCTGAGGGGATGACGGCTCTGGTCAATCACATCCGCCCCAGAGGGGATGACGGCTCATGATAATGGCGGTAAAAGAGCTAATGGAATGCAACCCTTttgttttgatgtatttgataccattccactccagccattaccacgagcctgtcctccccaattaaggtgccaccagcctcctcagCATACAAATGGCTCGGGTGATGTGAGGCTTTATTAGTTGAGTAAAGACCTATGTAATTTGCTAGGTGATTATCTATGTTTTACCAGAATAAAAGCAGGCCTAAACTACCTGAGAAAA
>XM_036986784.1
AAAAACACGACAGATCACATGACTAGCACCGAGAAGCAGGGAGAAACATGGCCGTCTCCGGTGTGTTTAAAGCGGGTCTGTTCAACCACAAAGTGGCGGTGGTAACGGGAGGAGGCACCGGAATCGGTAAAGCCATCTCCTCCGACCTGCTGAAGCTGGGTTGTAACGTGGTGATCTCCAGTAGGAAGTTGGAGAGGCTGGAGGCTGCAGCTGAAGAGCTGAGACAGAGTATCCCTGAGTCTAGTCCTGCATCTGTCACCCCTATAGTCTGTAACATACGCAACGAGGAGGAGGTGAAGTCTCTGGTGGGGTCAGTGTTGCAGCAGTATGGTCGGATAGACTACCTGGTAAATAACGGTGGAGGTCAGTTCAGCAGCCCAGCAGAACACACCTCATCTAAGGGGTGGAAGGCTGTCATAGACACCAACCTCACAGGAACCTTCCACTGCTGCAAGGaagTGTATGCTGCATGGATGAAGGAGAACGGAGGAGTGATCGTCAACATCATCGCTGATATGTGGAAGGGCTTCCCAGGCATGGCTCATACCGGAGCAGCGCGGGCCGCTGTAGACAACCTAACTAAGACTCTGGCCATCGAATGGGCCGTGTCTGGAGTCAGAGTCAACGCCATAGCACCgGGTACCATCATCTCCAAGACAGCCGTTGAGAACTATAAGGAGTTTGGACCAACACTGTTTAAGATGTCTATTCCCTTCAGCCCTGCTAAAAGACTGGGAGTCCCAGAGGAGtctctctctccgtctctctctgtgtgtgttctgacggtctctctccctctctctctctgtgtgtgttctgacggtctctctctccctctctctctctctctgtgtgttcagcaCAGTGCTTCAGACCGCTTTGAGACTGAcggtctctccccccctctctctgtgtgttctgacagtctttctctccctctctctctgtgtgtgttctgacagtctctctctccc

Function

symbol description
pecr Predicted to enable trans-2-enoyl-CoA reductase (NADPH) activity. Predicted to be involved in phytol metabolic process. Predicted to be active in peroxisome. Orthologous to human PECR (peroxisomal trans-2-enoyl-CoA reductase).

NR:

description
peroxisomal trans-2-enoyl-CoA reductase

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG:

id description
K07753 PECR; peroxisomal trans-2-enoyl-CoA reductase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036986785.1 False 1474 mRNA 0.51 8 90721147 90736113
XM_036986784.1 True 974 mRNA 0.53 7 90721154 90728081

Neighbor

gene id symbol gene type direction distance location
LOC110530875 rpl37a coding upstream 11369 90700188 ~ 90709778 (+)
zgc:162816 LOC106569720 coding upstream 46283 90658311 ~ 90674864 (+)
LOC110531056 LOC106591834 coding upstream 68442 90591990 ~ 90652705 (+)
LOC110517228 LOC106597294 coding upstream 175889 90439800 ~ 90545258 (+)
LOC118965588 NA coding upstream 320674 90398599 ~ 90400473 (+)
ndufb3 ndufb3 coding downstream 1118 90737231 ~ 90743084 (+)
LOC110530867 LOC106569722 coding downstream 43010 90779123 ~ 90796938 (+)
LOC110530865 LOC106595329 coding downstream 63875 90799988 ~ 90830525 (+)
LOC110530903 LOC106569743 coding downstream 177660 90913773 ~ 90916737 (+)
rgs20 LOC106592360 coding downstream 503773 91239886 ~ 91260968 (+)
G760844 NA non-coding upstream 28103 90692425 ~ 90693044 (+)
G760837 NA non-coding upstream 59634 90661231 ~ 90661513 (+)
G760832 NA non-coding upstream 63029 90657807 ~ 90658118 (+)
G760817 NA non-coding upstream 121363 90599041 ~ 90599784 (+)
G760802 NA non-coding upstream 135495 90585116 ~ 90585652 (+)
G760886 NA non-coding downstream 69027 90805140 ~ 90805628 (+)
G760887 NA non-coding downstream 69517 90805630 ~ 90862789 (+)
G760892 NA non-coding downstream 82562 90818675 ~ 90824470 (+)
G760894 NA non-coding downstream 94828 90830941 ~ 90831758 (+)
G761221 NA non-coding downstream 142182 90878295 ~ 90878639 (+)
G760718 NA other upstream 320675 90362653 ~ 90400472 (+)
G760623 NA other upstream 512188 90160270 ~ 90208959 (+)
G759892 NA other upstream 1024240 89696420 ~ 89696907 (+)
LOC118965583 LOC106569839 other upstream 1061800 89560138 ~ 89659347 (+)
G760857 NA other downstream 34004 90770117 ~ 90771037 (+)
G761244 LOC106569734 other downstream 216879 90952992 ~ 90972563 (+)
G761280 NA other downstream 283425 91007569 ~ 91040568 (+)
G761291 NA other downstream 365206 91101319 ~ 91104154 (+)

Expression


Co-expression Network