ndufb3 (ndufb3)


Basic Information

Item Value
gene id ndufb3
gene name ndufb3
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 90737231 ~ 90743084 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036986786.1
CCAGACTATGGTTCTGACCGACAAAAACACTGGATTGTTTGCGCTCCGACAAAAGTCTAAGACGTACTAAGTGTGGTCTCTTTTGTGTACCGTAGCAGTGCCGTACATCAGATGCAATTGTCGAAGTGCTTCATCCACAACAGAGGTCACAAACAGACAGGATGGGAGGAGAACACGGCAGTAAATTAAACCTGCCAGACTTTAAGCAGTGGAAGGTCGAGGGAACGCCTCTGGAGTTCACACAGCAGAGGCTGGCAGCTAGAGGACTGAAGGACCCATGGGcacgTAACGAGGTGTGGAGGTACGTGGGAGGCTTCAGTCGTCCTGTATCCCTGGGAGACGTGATGCTGAGGGGCTTTAAATGGGGCTTTGCTGCCTTCGCTGTGGCTCTGACTGTAGAGTACGCTCTCTTCCCCCCAAAGAAGTCTGACCACTGACCTCTAACCCCAGAACGCTTCGGAACATGACCGGATCACATGTTTTTTCTGTATAATAAATGTTGAGTGTTTTCATCCACTAAA
>TU864974
GACGTACTAAGTGTGGTCTCTTTTGTGTACCGTAGCAGTGCCGTACATCAGATGCAATTGTCGAAGTGCTTCATCCACAACAGAGGTCACAAACAGACAGGATGGGAGGAGAACACGGCAGTAAATTAAACCTGCCAGACTTTAAGCAGTGGAAGGTCGAGGGAACGCCTCTGGAGTTCACACAGCAGAGGCTGGCAGCTAGAGGACTGAAGGACCCATGGGcacgTAACGAGGTGTGGAGGTACGTGGGAGGCTTCAGTCGTCCTGTATCCCTGGGAGACGTGATGCTGAGGGGCTTTAAATGGGGCTTTGCTGCCTTCGCTGTGGCTCTGACTGTAGAGTACGCTCTCTTCCCCCCAAAGAAGTCTGACCACTGACCTCTAACCCCAGAACGCTTCGGAACATGACCGGATCACATGTTTTTTCTGTATAATAAATGTTGAGTGTTTTCATCCACTAAA

Function

symbol description
ndufb3 Predicted to act upstream of or within electron transport chain. Predicted to be located in mitochondrial inner membrane and respirasome. Predicted to be integral component of membrane. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 25. Orthologous to human NDUFB3 (NADH:ubiquinone oxidoreductase subunit B3).

NR:

description
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036986786.1 False 521 mRNA 0.50 3 90737231 90743084
TU864974 True 461 TUCP 0.51 3 90737291 90743084

Neighbor

gene id symbol gene type direction distance location
pecr pecr coding upstream 1118 90721147 ~ 90736113 (+)
LOC110530875 rpl37a coding upstream 27453 90700188 ~ 90709778 (+)
zgc:162816 LOC106569720 coding upstream 62367 90658311 ~ 90674864 (+)
LOC110531056 LOC106591834 coding upstream 84526 90591990 ~ 90652705 (+)
LOC110517228 LOC106597294 coding upstream 191973 90439800 ~ 90545258 (+)
LOC110530867 LOC106569722 coding downstream 36039 90779123 ~ 90796938 (+)
LOC110530865 LOC106595329 coding downstream 56904 90799988 ~ 90830525 (+)
LOC110530903 LOC106569743 coding downstream 170689 90913773 ~ 90916737 (+)
rgs20 LOC106592360 coding downstream 496802 91239886 ~ 91260968 (+)
G760872 NA non-coding upstream 4843 90730990 ~ 90732388 (+)
G760871 NA non-coding upstream 7690 90728529 ~ 90729541 (+)
G760844 NA non-coding upstream 44187 90692425 ~ 90693044 (+)
G760837 NA non-coding upstream 75718 90661231 ~ 90661513 (+)
G760832 NA non-coding upstream 79113 90657807 ~ 90658118 (+)
G760886 NA non-coding downstream 62056 90805140 ~ 90805628 (+)
G760887 NA non-coding downstream 62546 90805630 ~ 90862789 (+)
G760892 NA non-coding downstream 75591 90818675 ~ 90824470 (+)
G760894 NA non-coding downstream 87857 90830941 ~ 90831758 (+)
G761221 NA non-coding downstream 135211 90878295 ~ 90878639 (+)
G760718 NA other upstream 336759 90362653 ~ 90400472 (+)
G760623 NA other upstream 528272 90160270 ~ 90208959 (+)
G759892 NA other upstream 1040324 89696420 ~ 89696907 (+)
LOC118965583 LOC106569839 other upstream 1077884 89560138 ~ 89659347 (+)
G760857 NA other downstream 27033 90770117 ~ 90771037 (+)
G761244 LOC106569734 other downstream 209908 90952992 ~ 90972563 (+)
G761280 NA other downstream 276454 91007569 ~ 91040568 (+)
G761291 NA other downstream 358235 91101319 ~ 91104154 (+)
G761750 NA other downstream 820989 91564073 ~ 91567098 (+)

Expression


Co-expression Network