G663962


Basic Information

Item Value
gene id G663962
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 1323403 ~ 1331182 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU755746
gctgtagtgcagagatacggctgtagtgtggagttacggctgtagtgtagagatacggctgtagtgtagagtagagttacggctgtagtgtagagatacggctgtagtgtagggatacggctgtagtgtagcgatacggctgtagtgtagagatacggctgtagtgtagagttacggctgtagtgtggagatacggctgtagtgtagagttacggctgtagagtagagatacggctgtagtgtggagatacggctgtagtgtagagttacggctgtttTAAAGTAGAGATACGGCTGcagtgtagagttacggctgtagtgtagagtagggttacggctgtagagtagagttacggctgtagtgtagagtagagatacggctgtagtgtagggatacggctgtagtgtagagatatggctgtagtgtagactagagatacggctgtagtgtagagtagagatacggctgtagtgtagagacacGGCTGTATTgtagttacggctgtagtgtagagttacggctgtagtgtagggatacggctgtagtgtagagatatggctgtagtgtagactagagatacggctgtagtgtagagtagagatacggctgtagtgtagttacggctgtagtgtatagttgtggctgtagtgtggagatacggctgtagtgtagtgatacggctgtagtgtggagatacggctgtagtgtggagttacggctgtagtgtagggatacggctgtagtgtagcgatacggctgtagtgtggagatacggctgtagtgtagagttacggctgtagagtagagatacggctgtagtgtggagatacggctgtagtgtagagttacggctgtttTAAAGTAGAGATACGGCTGcagtgtagagttacggctgtagtgtagagtagggttacggctgtagagtagagttacggctgtagtgtagagtagagatacggctgtagtgtagagtagagttacggctgtagtgtagagttacggctgtagtgtagagttacggctgtagtgtagagttacggctgtagtgtagagatacggctgtagtgtagagttacggctgtagtgtagagttacggctgtggtgtagagttacggctgtggtgtagagttacggctgtagtgtagagttacggctgtagtgtagagatacggctgtagtgtagagttacggctgtagtgtagagttacggctgtggtgtagagttacggctgtggtgtagagttacggctgtagtgtagagttacggctgtagtgtagagatacggctgtagtgtggagttacggctgtagtgtgaAATTATAGTTAGCAGCATTTTAGTCACATAAAGACTGTTAAACTAGCTGTTTAGTCTGTGTTTATTAAGTATGCAATAAACATGTAACATTTCTATCAAGaattggcaactcgttctcattctgagaaaatAAGGACgaccacttgatttcaacatctgaacaaagtggacaggctaacATGCTGTTAACGGAAGGCAGGGTCATAACTAATAAACTACTGAATGTAGAGCTGGTGAAATTATACCGAGATCCAAGATGGCTGAACTTGGACTGGACTATCACGTGGGCTTGTGGTTGAGAGAGAGTTGATGAGACCAGTGAACGTGCattatgcaacaacaacaaaagaaggCCATTTTTATAGTCAGTGCTGAAAAgtagaggtgctgtatctcagctgtagaggtgctgtatctcagctgaAAAGACAGACCAGTGATTATtgtagaggtgctgtatctcagctgaAAAGACAGACCAGTGATTATtgtagagg
>TU755748
gctgtagtgcagagatacggctgtagtgtggagttacggctgtagtgtagagatacggctgtagtgtagagtagagttacggctgtagtgtagagatacggctgtagtgtagggatacggctgtagtgtagcgatacggctgtagtgtagagatacggctgtagtgtagagttacggctgtagtgtggagatacggctgtagtgtagagttacggctgtagagtagagatacggctgtagtgtggagatacggctgtagtgtagagttacggctgtttTAAAGTAGAGATACGGCTGcagtgtagagttacggctgtagtgtagagtagggttacggctgtagagtagagttacggctgtagtgtagagtagagatacggctgtagtgtagggatacggctgtagtgtagagatatggctgtagtgtagactagagatacggctgtagtgtagagtagagatacggctgtagtgtagagacacGGCTGTATTgtagttacggctgtagtgtagagttacggctgtagtgtagggatacggctgtagtgtagagatatggctgtagtgtagactagagatacggctgtagtgtagagtagagatacggctgtagtgtagttacggctgtagtgtatagttgtggctgtagtgtggagatacggctgtagtgtagtgatacggctgtagtgtggagatacggctgtagtgtggagttacggctgtagtgtagggatacggctgtagtgtagcgatacggctgtagtgtggagatacggctgtagtgtagagttacggctgtagagtagagatacggctgtagtgtggagatacggctgtagtgtagagttacggctgtttTAAAGTAGAGATACGGCTGcagtgtagagttacggctgtagtgtagagtagggttacggctgtagagtagagttacggctgtagtgtagagtagagatacggctgtagtgtagagtagagttacggctgtagtgtagagttacggctgtagtgtagagttacggctgtagtgtagagttacggctgtagtgtagagatacggctgtagtgtagagttacggctgtagtgtagagttacggctgtggtgtagagttacggctgtggtgtagagttacggctgtagtgtagagttacggctgtagtgtagagttacggctgtggtgtagagttacggctgtggtgtagagttacggctgtagtgtagagttacggctgtagtgtagagatacggctgtagtgtggagttacggctgtagtgtgaAATTATAGTTAGCAGCATTTTAGTCACATAAAGACTGTTAAACTAGCTGTTTAGTCTGTGTTTATTAAGTATGCAATAAACATGTAACATTTCTATCAAGaattggcaactcgttctcattctgagaaaatAAGGACgaccacttgatttcaacatctgaacaaagtggacaggctaacATGCTGTTAACGGAAGGCAGGGTCATAACTAATAAACTACTGAATGTAGAGCTGGTGAAATTATACCGAGATCCAAGATGGCTGAACTTGGACTGGACTATCACGTGGGCTTGTGGTTGAGAGAGAGTTGATGAGACCAGTGAACGTGCattatgcaacaacaacaaaagaaggCCATTTTTATAGTCAGTGCTGAAAAgtagaggtgctgtatctcagctgtagaggtgctgtatctcagctgaAAAGACAGACCAGTGATTATtgtagaggtgctgtatctcagctgtagaggtgctgtatctcagctgtagaggtgatgtagaggtgctgtatctcagctgtagaggtgctgtatctcagctgtagaggtgatgtatctcagctgtagaggtgctgtatctcagctgtagagaggtgctgtatctcagctgtagaggtgatgtatctcagctgtagaggtgctgtatctcagctgtagaggtgatgtagaggtgatgtatctcagctgtagaggtgatgtatctcagctgtagagaggtgctgtatctcagctgtagaggtgatgtatctcagctgtagaggtgctgtatctcagctgtagaggtgatgtagaggtgatgtatctcagctgtagaggtgctgtatctcagctgtagaggtgctgtatctcacatgtagaggtgatgtatctcagctgtagaggtgatgtatctcagctgtagaggtgctgtatctcagccgtagaggtgctgtatctcagccgtagaggtgatgtatctcagctgtagaggtgATGTATCTCAGCTGTAGAGAGGTGCTGTATATCagctgtagaggtgctgtatatcagctgtagaggtgatgtatctcagccgtagaggtgctgtatctcagctgtagatAGGTGCTGTTTCTCAGCTGTAGAGAGGTGAtgtatctcagctgtagaggtgatgtatctcagctgtagaggtgctgtatctcagctgtagaggtgatgtatctcagccgtagaggtgctgtatctcagctgtagagaggtgatgtatctcagctgtagaggGGATGTATCTCAGCCgtagaggtgctgtatctcagctgtagaggtgatgtagaggtgatgtatctcagctgtagagaggtgatgtatctcagctgtagaggtgctgtatctcagctgtagaggtgatgtatctcagctgtagaggtgctgtatctcagctgtagaggtgatgtatctcagctgtagaggtgatgtatctcagctgtagaggtgctgtatctcagctgtagaggtgctgtatctcagctgtaCTGTTGTAAAGTGATTTAGGGGTAATGGTCACAAAGCTACTGGGTAGCTAAATCCATGTTGACACTAGCAGTTGAGTCCAGTCTGTACTTGTCCATTTGCGGTCTAGCTGCAGTCGTTGTGGATGAACTGCAGCTGGGTCATGGCCGATCCACAGCAGAGTGGGTAGACGACCATTATAGGCCCTTCTTGGTGGGCGCACTGAGTTTCCTCATCCCTCGTATCCTCCCTAACAACTCCCTGACAAAGAcctgcagagacagagacagagaaagatagatagacagacacagagagagagagagagagagagagagagagagagagagagagatagacatagaggcagagagagtggggTGTCATTAAAAATGGCCACTCTGAATGGGGTGTcttttagagtggacagtcagaatggggtgtcctttagggtggacagtcagaatggagtgtccattagagtggacagtcagaatggggtgtccattagagtggacagtcagaatggggtgtcctttagggtggacagtcagaatggggtgtcctttagggtggacagttagtcctgatgtcctttagagtggacagtcagaatggggtgtcctttagagtggacagtcagaatggagtgtcctttagagtggacagtcagaattgggtgtcctttagggtggacagtcagaatggggtgtcctttagagtggacagtcagaatggggtgtcctttagggtggacagtaagaatggggtgtcctttagggtggacagtcagaatggggtgtccattagggtggacagtcagaatggggtgtccattagagtggacagtcagaatggggtgtccattagagtggacagtcagaatggggtgtcctggtgtcctttagggtggacagtcagaatggggtgtccattagagttgacagtcagaatggggtgt

Function

NR:

description
PREDICTED: uncharacterized protein LOC106609981 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU755746 False 1815 lncRNA 0.46 2 1323403 1325845
TU755748 True 3714 TUCP 0.47 5 1323403 1331182
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110516199 fam84a coding upstream 456012 863590 ~ 867391 (+)
LOC110530744 LOC100286411 coding upstream 650518 576383 ~ 672885 (+)
LOC118965477 NA coding downstream 696023 2021868 ~ 2027055 (+)
LOC118965478 NA coding downstream 734352 2058495 ~ 2061976 (+)
LOC110523088 rab10 coding downstream 965537 2291382 ~ 2350985 (+)
LOC118965479 NA coding downstream 966523 2292368 ~ 2295883 (+)
LOC118965480 NA coding downstream 1117261 2443106 ~ 2444575 (+)
G663958 NA non-coding upstream 18228 1304759 ~ 1305175 (+)
G663954 NA non-coding upstream 24217 1298973 ~ 1299186 (+)
G663951 NA non-coding upstream 27483 1295702 ~ 1295920 (+)
G663945 NA non-coding upstream 31253 1291909 ~ 1292150 (+)
G663944 NA non-coding upstream 31722 1291439 ~ 1291681 (+)
G663967 NA non-coding downstream 23647 1349492 ~ 1363800 (+)
G663976 NA non-coding downstream 54969 1380814 ~ 1381360 (+)
G663987 NA non-coding downstream 74278 1400123 ~ 1401222 (+)
G664026 NA non-coding downstream 91994 1417839 ~ 1418134 (+)
G664035 NA non-coding downstream 110913 1436758 ~ 1438205 (+)
G663377 NA other upstream 564036 757827 ~ 759367 (+)
G663359 NA other upstream 602368 717893 ~ 721035 (+)
G663012 NA other upstream 1118333 204123 ~ 205230 (+)
G662941 NA other upstream 1238864 62282 ~ 84539 (+)
G664034 NA other downstream 109225 1435070 ~ 1436094 (+)
G664560 NA other downstream 905500 2231345 ~ 2235813 (+)
G664930 NA other downstream 1137830 2463675 ~ 2479558 (+)
LOC110529249 tfap2d other downstream 1416791 2742466 ~ 2759003 (+)

Expression

G663962 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 40.
End of interactive chart.

G663962 Expression in each Bioproject

Bar chart with 12 bars.
G663962 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 50.
End of interactive chart.

Co-expression Network