G664035


Basic Information

Item Value
gene id G664035
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 1436758 ~ 1438205 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU755845
ATTTGTTGATACTGGTCAGGACCTAAACCCATCAGTAGATCAGACAGGTTAGTGATGTAATCAATCAGAGCTCACTGCACCCATCAGTGAGAtatagttggtgtgtgtgtgtgtgtgtgttcaggtgtgttacctgtgtcTCCAGACAGGCTCATGGCGCTGCGGCTGCGTGCCAAGTAGGAGTGTGTGGGCTGTAGCAGACGATTGACCACTGTGTTCTCCCACGGGGTCAGCGGCATACAACGCATGCctggaacgaacacacacacagatcgtTAGTTGAGATGCAAATGCAGTAATGGGAGGATAGCCATAGTAACGTGCAGTAATGGGAGGATAGCCATAGTAACGTGCAGTAATGGGAGGATAGCCATAGTAACGTGCAGTAATGGGAGGATAGCCATAGTAACGTGCAGTAATGGGAGGATAGCCATAGTAACGTGCAGTAATGGGAGGATAGCCATAGTAACGTGCGTTAAGGGTAGGATCACCTTAGTAACGTACGGTAAGAGGGGAATCGCCATAGTAACATGCGGTAAGGGGGGAATCACCATAGTAACTGCGGTACAGGGAGGATCGCCATAGTAACGTGCGGTAAGGGGGGAATTGCCATAGTAACGTGCTGTAACGGGAGGATCGCCATAGTAACGTGCGGTAAGGGAAGGATCGCCATAGTAACGTGCGGTAAGGGGAGGATCGCCATAGTAACATGCAGTAAGGGGAGGATCGCCATAGTAACATGCAGTAATGGGAGGATCGCCATAGTAACATGCAGTAAGGGGAGGATCGCCATAGTAATGTGCAGTAAGGGGAGGATCGCCATAGTAACGTGCGGTAAAGGGAGGACCGCCATAGTAACATGCAGTAAGGGGAGGATCTCCATAGTAACATGCAGTAAGGGGAGGATCGCCATAGTAACTGAGAAAACGTGCAAAAGAACATGGTGAATTAAGTGAACCGTTCTGTGCTTTAACCAGTGTGACAGGATCCGTGTCCTTTTGGGTTTCATTTGAGATGCAGACATCATGGGGGATAGATCCACATCCCAGAGTCCCTTTCATTCATTATCCAATTACTCAATACACGATTTACTGaaagacagagctggtgtgagtgtg

Function

NR:

description
PREDICTED: germinal-center associated nuclear protein isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU755845 True 1118 lncRNA 0.49 3 1436758 1438205

Neighbor

gene id symbol gene type direction distance location
LOC110516199 fam84a coding upstream 569367 863590 ~ 867391 (+)
LOC110530744 LOC100286411 coding upstream 763873 576383 ~ 672885 (+)
LOC118965477 NA coding downstream 583663 2021868 ~ 2027055 (+)
LOC118965478 NA coding downstream 621992 2058495 ~ 2061976 (+)
LOC110523088 rab10 coding downstream 853177 2291382 ~ 2350985 (+)
LOC118965479 NA coding downstream 854163 2292368 ~ 2295883 (+)
LOC118965480 NA coding downstream 1004901 2443106 ~ 2444575 (+)
G664026 NA non-coding upstream 18624 1417839 ~ 1418134 (+)
G663987 NA non-coding upstream 35536 1400123 ~ 1401222 (+)
G663976 NA non-coding upstream 55398 1380814 ~ 1381360 (+)
G663967 NA non-coding upstream 72958 1349492 ~ 1363800 (+)
G663962 NA non-coding upstream 110913 1323403 ~ 1331182 (+)
G664039 NA non-coding downstream 2745 1440950 ~ 1447748 (+)
G664040 NA non-coding downstream 9652 1447857 ~ 1451795 (+)
G664055 NA non-coding downstream 37434 1475639 ~ 1477391 (+)
G664057 NA non-coding downstream 39308 1477513 ~ 1477810 (+)
G664054 NA non-coding downstream 39663 1477868 ~ 1478603 (+)
G664034 NA other upstream 664 1435070 ~ 1436094 (+)
G663377 NA other upstream 677391 757827 ~ 759367 (+)
G663359 NA other upstream 715723 717893 ~ 721035 (+)
G663012 NA other upstream 1231688 204123 ~ 205230 (+)
G664560 NA other downstream 793140 2231345 ~ 2235813 (+)
G664930 NA other downstream 1025470 2463675 ~ 2479558 (+)
LOC110529249 tfap2d other downstream 1304431 2742466 ~ 2759003 (+)
G665266 NA other downstream 1373215 2811420 ~ 2812453 (+)

Expression

G664035 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.25.
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G664035 Expression in each Bioproject

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G664035 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 10.
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Co-expression Network