G664039


Basic Information

Item Value
gene id G664039
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 1440950 ~ 1447748 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU755850
ggtggatggattatcttggtaaaggagaaatgctcactaacagggatgtaaacacattttctgTAAAATTTCCGGGAATTTTTTTTGAGATCATGAAACacgttacatgttgcgtttatatttttgtttagtgtttatatacacacacgcgtgtgtgtgtatgtgcgtgtgtgtgtgtgtgtgtgcgtgtgtgcgtttaCCTCGGTCTGGAGAATGTAAGAGTGTGGCAGAGGAGTAGGACAGTCTCTTGGTTATAACTGGATCAGCTGCATGTTTAGAAAGGTTCATGGTCGACACAGACCGCCTGTCAGCATCCCCGGGTGTGGTGGGTGTGTTTCCAGGCAGTGCTCCGCCCCAGGACCAGCGGTTGGGTGTGTGTTTGGCTCTCTGACTTCTCTCCACCGTCCGACGCATCACCGCCTCATGACGGGCcttctcctcctccaggttctgtcttctcttctcctccacagCAGATCGTCTCctgtcctccttcctcctctgttcctccatcttcctcttcctctcctccaggtgtTTGTCATAGTAGTGTCtggccctctcctccc
>TU755851
GCGTGTTTCCCCCCCGGGTGTGGTGGGTGTTTACCCCCGGGTGTGGTGGGTGTGTTTCCAGGCAGTGCTCCGCCCCAGGACCAGCGGTTGGGTGTGTGTTTGGCTCTCTGACTTCTCTCCACCGTCCGACGCATCACCGCCTCATGACGGGCcttctcctcctccaggttctgtcttctcttctcctccacagCAGATCGTCTCctgtcctccttcctcctctgttcctccatcttcctcttcctctcctccaggtgtTTGTCATAGTAGTGTCtggccctctcctccc

Function

NR:

description
PREDICTED: ensconsin-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU755850 False 569 lncRNA 0.50 3 1440950 1447748
TU755851 True 289 lncRNA 0.60 2 1444554 1447748

Neighbor

gene id symbol gene type direction distance location
LOC110516199 fam84a coding upstream 573559 863590 ~ 867391 (+)
LOC110530744 LOC100286411 coding upstream 768065 576383 ~ 672885 (+)
LOC118965477 NA coding downstream 574120 2021868 ~ 2027055 (+)
LOC118965478 NA coding downstream 612449 2058495 ~ 2061976 (+)
LOC110523088 rab10 coding downstream 843634 2291382 ~ 2350985 (+)
LOC118965479 NA coding downstream 844620 2292368 ~ 2295883 (+)
LOC118965480 NA coding downstream 995358 2443106 ~ 2444575 (+)
G664035 NA non-coding upstream 2745 1436758 ~ 1438205 (+)
G664026 NA non-coding upstream 22816 1417839 ~ 1418134 (+)
G663987 NA non-coding upstream 39728 1400123 ~ 1401222 (+)
G663976 NA non-coding upstream 59590 1380814 ~ 1381360 (+)
G663967 NA non-coding upstream 77150 1349492 ~ 1363800 (+)
G664040 NA non-coding downstream 109 1447857 ~ 1451795 (+)
G664055 NA non-coding downstream 27891 1475639 ~ 1477391 (+)
G664057 NA non-coding downstream 29765 1477513 ~ 1477810 (+)
G664054 NA non-coding downstream 30120 1477868 ~ 1478603 (+)
G664056 NA non-coding downstream 31179 1478927 ~ 1480288 (+)
G664034 NA other upstream 4856 1435070 ~ 1436094 (+)
G663962 NA other upstream 109768 1323403 ~ 1331182 (+)
G663377 NA other upstream 681583 757827 ~ 759367 (+)
G663359 NA other upstream 719915 717893 ~ 721035 (+)
G663012 NA other upstream 1235880 204123 ~ 205230 (+)
G664560 NA other downstream 783597 2231345 ~ 2235813 (+)
G664930 NA other downstream 1015927 2463675 ~ 2479558 (+)
LOC110529249 tfap2d other downstream 1294888 2742466 ~ 2759003 (+)
G665266 NA other downstream 1363672 2811420 ~ 2812453 (+)

Expression

G664039 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 8.
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G664039 Expression in each Bioproject

Bar chart with 18 bars.
G664039 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 60.
End of interactive chart.

Co-expression Network