G664057



Basic Information


Item Value
gene id G664057
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 1477513 ~ 1477810 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU755882
ctgcacatagggacaaagaccttactttttagagaaatgtcctctggtctgattaaacaaaaataaaactgtttagccataatgaccatcgttatgtttggaggaaaaagggggaggcttacaagccgaagaccaccatcccaaccgtgaagcacgggggtgatttactgcaggagggactggtgcacttcaaactAGAaagcatcatgaggaaagaaaatgatgtggaaatattgaagcaacatctcaagacatcagtcaggaagttaaagcttggtcgcaaatgggtcttccaaat

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU755882 True 298 lncRNA 0.43 1 1477513 1477810
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110516199 fam84a coding upstream 610122 863590 ~ 867391 (+)
LOC110530744 LOC100286411 coding upstream 804628 576383 ~ 672885 (+)
LOC118965477 NA coding downstream 544058 2021868 ~ 2027055 (+)
LOC118965478 NA coding downstream 582387 2058495 ~ 2061976 (+)
LOC110523088 rab10 coding downstream 813572 2291382 ~ 2350985 (+)
LOC118965479 NA coding downstream 814558 2292368 ~ 2295883 (+)
LOC118965480 NA coding downstream 965296 2443106 ~ 2444575 (+)
G664055 NA non-coding upstream 122 1475639 ~ 1477391 (+)
G664040 NA non-coding upstream 25718 1447857 ~ 1451795 (+)
G664039 NA non-coding upstream 29765 1440950 ~ 1447748 (+)
G664035 NA non-coding upstream 39308 1436758 ~ 1438205 (+)
G664026 NA non-coding upstream 59379 1417839 ~ 1418134 (+)
G664054 NA non-coding downstream 58 1477868 ~ 1478603 (+)
G664056 NA non-coding downstream 1117 1478927 ~ 1480288 (+)
G664068 NA non-coding downstream 20894 1498704 ~ 1498936 (+)
G664071 NA non-coding downstream 21300 1499110 ~ 1574193 (+)
G664077 NA non-coding downstream 26213 1504023 ~ 1504454 (+)
G664034 NA other upstream 41419 1435070 ~ 1436094 (+)
G663962 NA other upstream 146331 1323403 ~ 1331182 (+)
G663377 NA other upstream 718146 757827 ~ 759367 (+)
G663359 NA other upstream 756478 717893 ~ 721035 (+)
G663012 NA other upstream 1272443 204123 ~ 205230 (+)
G664560 NA other downstream 753535 2231345 ~ 2235813 (+)
G664930 NA other downstream 985865 2463675 ~ 2479558 (+)
LOC110529249 tfap2d other downstream 1264826 2742466 ~ 2759003 (+)
G665266 NA other downstream 1333610 2811420 ~ 2812453 (+)

Expression


G664057 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 6.
End of interactive chart.

G664057 Expression in each Bioproject

Bar chart with 19 bars.
G664057 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
End of interactive chart.

Co-expression Network