Gene
RNA
| Item | Value |
|---|---|
| gene id | G664868 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 2250441 ~ 2252039 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: keratin-associated protein 5-4-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU756856 | True | 507 | lncRNA | 0.41 | 2 | 2250441 | 2252039 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531067 | dnmt3a | coding | downstream | 49534 | 2110060 ~ 2200907 (-) |
| LOC110529242 | LOC106591799 | coding | downstream | 153609 | 2061698 ~ 2096832 (-) |
| selenoi | LOC106571011 | coding | downstream | 228815 | 1976310 ~ 2021626 (-) |
| LOC110529244 | NA | coding | downstream | 279977 | 1968290 ~ 1975576 (-) |
| tbx18 | LOC106571000 | coding | downstream | 422047 | 1807585 ~ 1828394 (-) |
| LOC110529255 | rps12 | coding | upstream | 694976 | 2947015 ~ 2957275 (-) |
| LOC118965659 | NA | coding | upstream | 704585 | 2956624 ~ 2956701 (-) |
| ccm2 | ccm2 | coding | upstream | 829173 | 3081212 ~ 3120444 (-) |
| LOC118965483 | LOC100692480 | coding | upstream | 1461738 | 3713777 ~ 3823317 (-) |
| LOC110529264 | LOC106571015 | coding | upstream | 1627794 | 3879833 ~ 3959350 (-) |
| G664864 | NA | non-coding | downstream | 7621 | 2242128 ~ 2242820 (-) |
| G664809 | NA | non-coding | downstream | 105378 | 2144454 ~ 2145063 (-) |
| G664800 | NA | non-coding | downstream | 128982 | 2120414 ~ 2121459 (-) |
| G664798 | NA | non-coding | downstream | 131011 | 2117408 ~ 2119430 (-) |
| G664796 | NA | non-coding | downstream | 137026 | 2112605 ~ 2113415 (-) |
| G664869 | NA | non-coding | upstream | 18043 | 2270082 ~ 2270739 (-) |
| G664871 | NA | non-coding | upstream | 26935 | 2278974 ~ 2279641 (-) |
| G664872 | NA | non-coding | upstream | 29419 | 2281458 ~ 2281838 (-) |
| G664873 | NA | non-coding | upstream | 45243 | 2297282 ~ 2298299 (-) |
| G664874 | NA | non-coding | upstream | 47438 | 2299477 ~ 2312627 (-) |
| G664733 | NA | other | downstream | 255911 | 1993889 ~ 1994530 (-) |
| armc1l | LOC106571055 | other | downstream | 751870 | 1479450 ~ 1498700 (-) |
| G664089 | NA | other | downstream | 812000 | 1437760 ~ 1438441 (-) |
| G663235 | NA | other | downstream | 1820183 | 428191 ~ 430258 (-) |
| G663215 | NA | other | downstream | 1863459 | 381322 ~ 388193 (-) |
| G664763 | rab10 | other | upstream | 39363 | 2291402 ~ 2350981 (-) |
| G665603 | NA | other | upstream | 984849 | 3236888 ~ 3240052 (-) |
| G665655 | NA | other | upstream | 1088017 | 3340056 ~ 3340960 (-) |
| G665718 | NA | other | upstream | 1165074 | 3417113 ~ 3418288 (-) |
| G665797 | NA | other | upstream | 1268751 | 3520790 ~ 3521623 (-) |
