Gene
RNA
| Item | Value |
|---|---|
| gene id | G664609 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 2262256 ~ 2267028 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106511711, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU756553 | True | 524 | lncRNA | 0.43 | 2 | 2262256 | 2267028 |
2,258,000
2,259,000
2,260,000
2,261,000
2,262,000
2,263,000
2,264,000
2,265,000
2,266,000
2,267,000
2,268,000
2,269,000
2,270,000
2,271,000
NC_048572.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118965478 | NA | coding | upstream | 200419 | 2058495 ~ 2061976 (+) |
| LOC118965477 | NA | coding | upstream | 235201 | 2021868 ~ 2027055 (+) |
| LOC110516199 | fam84a | coding | upstream | 1394865 | 863590 ~ 867391 (+) |
| LOC110530744 | LOC100286411 | coding | upstream | 1589371 | 576383 ~ 672885 (+) |
| LOC110523088 | rab10 | coding | downstream | 24354 | 2291382 ~ 2350985 (+) |
| LOC118965479 | NA | coding | downstream | 25340 | 2292368 ~ 2295883 (+) |
| LOC118965480 | NA | coding | downstream | 176078 | 2443106 ~ 2444575 (+) |
| LOC110529249 | tfap2d | coding | downstream | 475438 | 2742466 ~ 2759003 (+) |
| LOC110529251 | tcf21 | coding | downstream | 671791 | 2938819 ~ 2941312 (+) |
| G664606 | NA | non-coding | upstream | 339 | 2255336 ~ 2261917 (+) |
| G664601 | NA | non-coding | upstream | 12172 | 2249709 ~ 2250084 (+) |
| G664586 | NA | non-coding | upstream | 39696 | 2220525 ~ 2222560 (+) |
| G664555 | NA | non-coding | upstream | 96078 | 2165921 ~ 2166178 (+) |
| G664531 | NA | non-coding | upstream | 150187 | 2110258 ~ 2112069 (+) |
| G664615 | NA | non-coding | downstream | 12559 | 2279587 ~ 2279924 (+) |
| G664618 | NA | non-coding | downstream | 32448 | 2299476 ~ 2309347 (+) |
| G664619 | NA | non-coding | downstream | 40891 | 2307919 ~ 2308383 (+) |
| G664665 | NA | non-coding | downstream | 132647 | 2399675 ~ 2406152 (+) |
| G664666 | NA | non-coding | downstream | 134367 | 2401395 ~ 2403744 (+) |
| G664560 | NA | other | upstream | 26443 | 2231345 ~ 2235813 (+) |
| G664034 | NA | other | upstream | 826162 | 1435070 ~ 1436094 (+) |
| G663962 | NA | other | upstream | 931074 | 1323403 ~ 1331182 (+) |
| G663377 | NA | other | upstream | 1502889 | 757827 ~ 759367 (+) |
| G664930 | NA | other | downstream | 196647 | 2463675 ~ 2479558 (+) |
| G665266 | NA | other | downstream | 544392 | 2811420 ~ 2812453 (+) |
| G665318 | NA | other | downstream | 685913 | 2947014 ~ 2957181 (+) |
| zgc:153284 | LOC106571006 | other | downstream | 720836 | 2976359 ~ 2996568 (+) |
