XLOC_002596 (ndufa9b)


Basic Information

Item Value
gene id XLOC_002596
gene name ndufa9b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 8128374 ~ 8129456 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004835
CTCAGTCAGCATACAACCTGTTAAGACATTAAGTTTAATACAGACAATTTACTTTAATTAAGTTTTATACAGATTTTATAGGGGAtcagaaaatgtaaatatgctTTCCTTTGAGGCGAATGAAAGCTGGATTTACTTCAGTTTCACTCAAACCAGTCAGAAGCACACATGGTCTGCTCTGTTCACAGACATTATAGCAAAAGAGCGGATTATTTGTGTGAGCTGCACAGACCACAAAATGTGGACACTTTTGAATTCTGTATATTTAAACCAAAGAGATAGTTTGACAGACTCAGCATTACTATGGCTCTGACGGCCATAATCATGGCGTCTGTCACACTGATTTGCCGTCCTGCGGGTATCCTTCCCAAGCTTTCAGGCACCTGTTCTCCGGTGTTGCTGGCAGCAGCTCCTGTGACGGTACAGCAGAGGAAGATTCATCATGCCGTAGTGCCCAGTGGAAAAGGAGGCCGCTCTTCCTTTAGTGGACTCGCTGCCACTGTTTTTGGAGCCACTGGCTTTCTTGGCCGATATGTTGTCAACCGTCTAGGACGTATGGGTTCCCAGGTTGTGATCCCTTACCGATGTGACCAGTATGATCTCATGTACCTCAGACCTATGGGCGATTTGGGACAGATCATCTTTATGGAATGGGATCCAAGAAACAAGGAGTCAATTCAAAGAGCAATCTCTCACTCCAACGTGGTGATCAACCTTGTCGGAAGAGAATGGGAGACCAGCAACTACAAGTATGAAGATGTGTTCGTCTCCATCCCTCTGCAGATTGCGAAGGCAACTCGTGAAGCTGGAATTAAAAAGTTCATTCATATGTCGCACCTTAACGCAGACATTCGCAGCCCCTCCAAGTATCTGAGAAATAAGGCAGTCGGTGAGGAGGCTGTGAGAAACGAGTTCCCTGATGCCATCATTATGAAAGCCTCTGAGCTCTTTGGAAGAGAGGACAGGTTCTTGAACCACTTTGCTAACATGCGCTGGTTTGGCACAGCTGTACCTCTAATTGCACTATGAGAGTTGTGGCTGATGTGCAGCAGGTGATTGTCtccagaaacatgttttgttgtg
>TCONS_00004836
GTTTGACAGACTCAGCATTACTATGGCTCTGACGGCCATAATCATGGCGTCTGTCACACTGATTTGCCGTCCTGCGGGTATCCTTCCCAAGCTTTCAGGCACCTGTTCTCCGGTGTTGCTGGCAGCAGCTCCTGTGACGGTACAGCAGAGGAAGATTCATCATGCCGTAGTGCCCAGTGGAAAAGGAGGCCGCTCTTCCTTTAGTGGACTCGCTGCCACTGTTTTTGGAGCCACTGGCTTTCTTGGCCGATATGTTGTCAACCGTCTAGGACGTATGGGTTCCCAGGTTGTGATCCCTTACCGATGTGACCAGTATGATCTCATGTACCTCAGACCTATGGGCGATTTGGGACAGATCATCTTTATGGAATGGGATCCAAGAAACAAGGAGTCAATTCAAAGAGCAATCTCTCACTCCAACGTGGTGATCAACCTTGTCGGAAGAGAATGGGAGACCAGCAACTACAAGTATGAAGATGTGTTCGTCTCCATCCCTCTGCAGATTGCGAAGGCAACTCGTGAAGCTGGAATTAAAAAGTTCATTCATATGTCGCACCTTAACGCAGACATTCGCAGCCCCTCCAAGTATCTGAGAAATAAGGCAGTCGGTGAGGAGGCTGTGAGAAACGAGTTCCCTGATGCCATCATTATGAAAGCCTCTGAGCTCTTTGGAAGAGAGGACAGGTTCTTGAACCACTTTGCTAACATGCGCTGGTTTGGCACAGCTGTACCTCTAATTGCA

Function

symbol description
ndufa9b Predicted to be involved in ubiquinone-6 biosynthetic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in mitochondrion. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 26. Orthologous to human NDUFA9 (NADH:ubiquinone oxidoreductase subunit A9).

GO:

id name namespace
GO:1901006 ubiquinone-6 biosynthetic process biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0003954 NADH dehydrogenase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-091116-31 Predicted to be involved in ubiquinone-6 biosynthetic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in mitochondrion. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 26. Orthologous to human NDUFA9 (NADH:ubiquinone oxidoreductase subunit A9).

Ensembl:

ensembl_id ENSDARG00000094312

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004835 False 1083 mRNA 0.45 1 8128374 8129456
TCONS_00004836 True 742 mRNA 0.49 1 8128434 8129175

Neighbor

gene id symbol gene type direction distance location
XLOC_002595 si:ch211-251f6.6 coding downstream 48544 8058850 ~ 8079830 (-)
XLOC_002594 si:ch211-251f6.7 coding downstream 74621 8051616 ~ 8053753 (-)
XLOC_002593 zgc:136254 coding downstream 81610 8045364 ~ 8046764 (-)
XLOC_002592 nfkbil1 coding downstream 86426 8034688 ~ 8041948 (-)
XLOC_002591 atp6v0a2a coding downstream 94906 7988746 ~ 8033468 (-)
XLOC_002597 CU633857.1 coding upstream 16892 8146348 ~ 8153043 (-)
XLOC_002598 dhx29 coding upstream 25418 8154874 ~ 8197049 (-)
XLOC_002599 plpp1a coding upstream 136516 8265972 ~ 8295342 (-)
XLOC_002600 csgalnact1a coding upstream 169528 8298984 ~ 8358396 (-)
XLOC_002601 tctn1 coding upstream 286661 8416117 ~ 8434816 (-)
XLOC_002590 NA non-coding downstream 144630 7981119 ~ 7983744 (-)
XLOC_002585 BX294661.1 non-coding downstream 235690 7870627 ~ 7892684 (-)
XLOC_002586 NA non-coding downstream 242334 7883753 ~ 7886040 (-)
XLOC_002575 BX537303.2 non-coding downstream 616251 7512008 ~ 7512123 (-)
XLOC_002572 NA non-coding downstream 874476 7238244 ~ 7253898 (-)
XLOC_002602 NA non-coding upstream 489262 8618718 ~ 8621543 (-)
XLOC_002603 NA non-coding upstream 509465 8638921 ~ 8657677 (-)
XLOC_002605 BX571955.1 non-coding upstream 546434 8675890 ~ 8677828 (-)
XLOC_002606 NA non-coding upstream 712242 8841698 ~ 8858568 (-)
XLOC_002609 CU694950.1 non-coding upstream 887265 9016721 ~ 9016837 (-)

Expression


Co-expression Network