G667043



Basic Information


Item Value
gene id G667043
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 4249794 ~ 4250786 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU759632
aggactcactcactaggaacaCTAAAATACCTGGTCCTAAGGTAATCTACCACAGGTCCTatagagggttcaatcaggactcactcactaggaacaCTAAAATACCAGAGGCTCTAAGGTAATCTACCACCGGTCCTatagagggttcaatcaggactcactcactaggaacactaaaatacctggccctaaggtaatctaccacaggtcctatagagggttcaatcaggactcactcactaggaacaCTACAATACCAGAGGCTGGCCCTAAGGTAATCTACCACAGGTCCTatagagggttcaatcaggactcactcactaggaacactacaataccaaaggctggccctaaggtaatctaccacagGTCCTatagagggttcaatcaggactcactcactaggaacactacaataccaaaggctggccctaaggtaatctaccacaggtcctacagagggttcaatcaggactcactcactaggaacactacaataccaaaggctggccctaaggtaatctaccacag

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU759632 True 531 lncRNA 0.47 2 4249794 4250786

Neighbor


gene id symbol gene type direction distance location
baalcb LOC106571017 coding downstream 201993 4037616 ~ 4047801 (-)
LOC110529266 LOC106571016 coding downstream 259686 3977332 ~ 3990108 (-)
LOC110529264 LOC106571015 coding downstream 290444 3879833 ~ 3959350 (-)
LOC118965483 LOC100692480 coding downstream 426477 3713777 ~ 3823317 (-)
ccm2 ccm2 coding downstream 1129350 3081212 ~ 3120444 (-)
LOC110529162 ptk2b coding upstream 29219 4279536 ~ 4358156 (-)
LOC110529271 ei2bb coding upstream 331761 4582547 ~ 4590496 (-)
LOC110529272 tmeda coding upstream 340684 4591470 ~ 4618613 (-)
LOC110529274 LOC106571028 coding upstream 368191 4618977 ~ 4621813 (-)
LOC118965591 NA coding upstream 521360 4772146 ~ 4832142 (-)
G667024 NA non-coding downstream 5084 4243749 ~ 4244710 (-)
G667019 NA non-coding downstream 40905 4207716 ~ 4208889 (-)
G666980 NA non-coding downstream 111753 4124351 ~ 4138041 (-)
G666979 NA non-coding downstream 126271 4121180 ~ 4123523 (-)
G666973 NA non-coding downstream 143538 4105865 ~ 4106256 (-)
G667077 NA non-coding upstream 132776 4383562 ~ 4383950 (-)
G667124 NA non-coding upstream 239687 4490473 ~ 4491493 (-)
G667146 NA non-coding upstream 277169 4527955 ~ 4535323 (-)
G667174 NA non-coding upstream 329497 4580283 ~ 4677334 (-)
G665927 NA other downstream 579647 3668232 ~ 3670147 (-)
G665797 NA other downstream 728171 3520790 ~ 3521623 (-)
G665718 NA other downstream 831506 3417113 ~ 3418288 (-)
G665655 NA other downstream 908834 3340056 ~ 3340960 (-)
G665603 NA other downstream 1009742 3236888 ~ 3240052 (-)
G667122 NA other upstream 238020 4488806 ~ 4490220 (-)
znf395b LOC106571047 other upstream 1298017 5535756 ~ 5551550 (-)
G668192 NA other upstream 1955772 6206558 ~ 6284021 (-)
G668238 NA other upstream 2029410 6280196 ~ 6281640 (-)
wdr21 dcaf4 other upstream 2535746 6786377 ~ 6801903 (-)

Expression


G667043 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 6.
End of interactive chart.

G667043 Expression in each Bioproject

Bar chart with 17 bars.
G667043 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
End of interactive chart.

Co-expression Network