XLOC_002597 (CU633857.1)


Basic Information

Item Value
gene id XLOC_002597
gene name CU633857.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 8146348 ~ 8153043 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004837
TTACATTGACAACAGCCTAACAATGACATGAAGCAGCCTAGGCAAACAAGTGTTTATCTAAATAGAAGCCAGTGCGCCAAAAACATCGTCACTATTCTTCTATTATAATTAAACTATGGTCCATTTTCTTGTGACGTTCTCCAAAAACGGCTGTATTGGCATACCTGTGAAGTTTTTATGCTGTTGTTGTTATGGTTGACAACGCGGTGCCTCGTTGAGTAGTTTGGCGCTGAAATGAACTGTCGCTCTAAAGGCGCGCACTCCTGGCGCTCGTCGCACCTGACGACAAACGGTCGCGCTGTCACGTCACTCACTTCAGCTCTGACTCTGAGCACAAACTGAACATCACGCTATGCAGACCTGCTTCTACACTCCGCTGCCCTGTCTGATGGATAATGCAGTGACTCCAGTCAACCAGTCTTATAATGAAGACCTTCTGAGCTTTGCCACAGGGGAGTATCAATCCACAGAAACACATTTAATGACACATGAAGTGTCCAACCACACAGATCTGGATCTCTCTTTAGAGCTCAACAGACAGCTTCATGCCACACTCAGGAGAAAGCAAGAGGAAATATCTGCCCTAAAGGAGACCAATGCTCACCTGAAAAACCTGACTAAACAGACTGAATATTACGCCACAATACTAGAtGCCCTGACAACATCGTTCCAGACAGACTCGCTGTCACAGTGCACTAATGAGTGGCTGAATGAAGATCATTCTCCAGAGCACTCCTGGATCTCTCTGCTGACTCAAGAGCAGCCATCAGATCCATCTTCCACAGCTTTAACTAACTCCAGCGCTGACACACAGAGCCCAGCATCAGAGGTCAAGCAGCATCTGTGGTCCAGCTGGATTGACCTTCTGTGTGGAGATGCTGAGGACTGTCCTACAGGCTCTAAGCGAATCAGGTTTGATAATGAACTTGAACAGCTTGATTTGAAGGCCCAGGATCAAATGGTTCCTGAGGATGTAACTAAAGAGTCAACCTTGGCTCAGGATCATCACCTTACGATGTCCTCTGAAAGGCAGAGGGTGAACATATTTGGGGCTTTTAATGGGTTTCAGGTTTTTACTGAAACCTCAACAGTCAAGTCTGATATAAACATCAGCAGCGATGGTGGGAAAGGTTTGTGTTTTAAGACCTCAATCAGAGACCATAGTACAGTAAAGACCAAGGTTTTCCCACATGGCAAGGCATTCACCTCTCACACACTAAGTGGATCCTGTCGGTTCCTTTGGGTTCCTAATGAGAGCTGAACCTAGGTGACTCGAATTGTTGAGTGAGTTGAAAAACTAACAGCATTTCATGTAGAGCCAAGGTGTTTTGTCCAGCTAAGACCAACCAAAGTACTTCATGTCCTGTAATCATGACACATCATTATGTGTACATAAACATGAGTCACATGACCTTCTCTGTGAAGATGCTAAAGCTCAGGCTTGATAATAACGTTGTACAACTAGATGTGAAATATCTGAAGAGCCAGGCTTTTATTTGACCTAAGATTGTTTCAGTACAATCTTTAAAAGTTATCTCACAGGCTCTTCCATGGAGCATCCATAGAACCATTTCACTCATTTAAATGGAAAAAGGTACTTCAGATTAGATTCAGAGTAGGACAAAAAATAGAACCCCCGACAGGTTTTGTGAAAACGCATACAAATGCCTTAAACTCGGAGGTGTtggatgaaaaatacagactgtggaatgagtttttaacagaaatattctgtaggttaaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000115315

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004837 True 1743 mRNA 0.44 5 8146348 8153043

Neighbor

gene id symbol gene type direction distance location
XLOC_002596 ndufa9b coding downstream 16892 8128374 ~ 8129456 (-)
XLOC_002595 si:ch211-251f6.6 coding downstream 66518 8058850 ~ 8079830 (-)
XLOC_002594 si:ch211-251f6.7 coding downstream 92595 8051616 ~ 8053753 (-)
XLOC_002593 zgc:136254 coding downstream 99584 8045364 ~ 8046764 (-)
XLOC_002592 nfkbil1 coding downstream 104400 8034688 ~ 8041948 (-)
XLOC_002598 dhx29 coding upstream 1831 8154874 ~ 8197049 (-)
XLOC_002599 plpp1a coding upstream 112929 8265972 ~ 8295342 (-)
XLOC_002600 csgalnact1a coding upstream 145941 8298984 ~ 8358396 (-)
XLOC_002601 tctn1 coding upstream 263074 8416117 ~ 8434816 (-)
XLOC_002602 NA coding upstream 465675 8618718 ~ 8621543 (-)
XLOC_002590 NA non-coding downstream 162604 7981119 ~ 7983744 (-)
XLOC_002585 BX294661.1 non-coding downstream 253664 7870627 ~ 7892684 (-)
XLOC_002586 NA non-coding downstream 260308 7883753 ~ 7886040 (-)
XLOC_002575 BX537303.2 non-coding downstream 634225 7512008 ~ 7512123 (-)
XLOC_002572 NA non-coding downstream 892450 7238244 ~ 7253898 (-)
XLOC_002603 NA non-coding upstream 485878 8638921 ~ 8657677 (-)
XLOC_002605 BX571955.1 non-coding upstream 522847 8675890 ~ 8677828 (-)
XLOC_002606 NA non-coding upstream 688655 8841698 ~ 8858568 (-)
XLOC_002609 CU694950.1 non-coding upstream 863678 9016721 ~ 9016837 (-)

Expression


Co-expression Network