Gene
RNA
| Item | Value |
|---|---|
| gene id | G667720 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 5912956 ~ 5917133 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| extensin-3-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU760461 | True | 425 | lncRNA | 0.41 | 3 | 5912956 | 5917133 |
5,906,000
5,907,000
5,908,000
5,909,000
5,910,000
5,911,000
5,912,000
5,913,000
5,914,000
5,915,000
5,916,000
5,917,000
5,918,000
NC_048572.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529172 | LOC106571080 | coding | upstream | 110469 | 5799702 ~ 5802487 (+) |
| emilin1a | LOC106571081 | coding | upstream | 124146 | 5738945 ~ 5788810 (+) |
| il17a/f3 | LOC106571057 | coding | upstream | 265953 | 5645057 ~ 5647003 (+) |
| mcm3 | mcm3 | coding | upstream | 283445 | 5596599 ~ 5629511 (+) |
| LOC118965486 | NA | coding | upstream | 334185 | 5571499 ~ 5578771 (+) |
| LOC110529287 | LOC106571054 | coding | downstream | 640745 | 6557878 ~ 6580013 (+) |
| LOC110529289 | LOC106571068 | coding | downstream | 802089 | 6719222 ~ 6722788 (+) |
| zfyve1 | LOC106571063 | coding | downstream | 844778 | 6761911 ~ 6786314 (+) |
| dpf3 | dpf3 | coding | downstream | 884921 | 6802054 ~ 6853052 (+) |
| LOC118965594 | NA | coding | downstream | 933287 | 6850420 ~ 6853052 (+) |
| G667708 | NA | non-coding | upstream | 29224 | 5883357 ~ 5883732 (+) |
| G667688 | NA | non-coding | upstream | 72589 | 5839037 ~ 5840367 (+) |
| G667680 | NA | non-coding | upstream | 109266 | 5803483 ~ 5803690 (+) |
| G667669 | NA | non-coding | upstream | 122262 | 5790421 ~ 5790694 (+) |
| G667609 | NA | non-coding | upstream | 235011 | 5643923 ~ 5677945 (+) |
| G667722 | NA | non-coding | downstream | 2491 | 5919624 ~ 5920360 (+) |
| G667729 | NA | non-coding | downstream | 11222 | 5928355 ~ 5928862 (+) |
| G667768 | NA | non-coding | downstream | 66134 | 5983267 ~ 5983611 (+) |
| G667782 | NA | non-coding | downstream | 92216 | 6009349 ~ 6011476 (+) |
| G667812 | NA | non-coding | downstream | 127283 | 6044416 ~ 6044509 (+) |
| G666768 | NA | other | upstream | 341469 | 5570888 ~ 5571487 (+) |
| G666447 | NA | other | upstream | 1066437 | 4845405 ~ 4846519 (+) |
| G666341 | LOC106571028 | other | upstream | 1291176 | 4618977 ~ 4621780 (+) |
| LOC110529270 | zc3h14 | other | upstream | 1335922 | 4573303 ~ 4577034 (+) |
| G668043 | NA | other | downstream | 176212 | 6093345 ~ 6185271 (+) |
| G668334 | NA | other | downstream | 494867 | 6412000 ~ 6413087 (+) |
| G668368 | NA | other | downstream | 528747 | 6445880 ~ 6446445 (+) |
| G668649 | NA | other | downstream | 1053946 | 6971079 ~ 6971604 (+) |
| G668628 | NA | other | downstream | 1072721 | 6989854 ~ 7076589 (+) |
