Gene
RNA
| Item | Value |
|---|---|
| gene id | G667729 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 5928355 ~ 5928862 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU760471 | True | 278 | lncRNA | 0.37 | 2 | 5928355 | 5928862 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529172 | LOC106571080 | coding | upstream | 125868 | 5799702 ~ 5802487 (+) |
| emilin1a | LOC106571081 | coding | upstream | 139545 | 5738945 ~ 5788810 (+) |
| il17a/f3 | LOC106571057 | coding | upstream | 281352 | 5645057 ~ 5647003 (+) |
| mcm3 | mcm3 | coding | upstream | 298844 | 5596599 ~ 5629511 (+) |
| LOC118965486 | NA | coding | upstream | 349584 | 5571499 ~ 5578771 (+) |
| LOC110529287 | LOC106571054 | coding | downstream | 629016 | 6557878 ~ 6580013 (+) |
| LOC110529289 | LOC106571068 | coding | downstream | 790360 | 6719222 ~ 6722788 (+) |
| zfyve1 | LOC106571063 | coding | downstream | 833049 | 6761911 ~ 6786314 (+) |
| dpf3 | dpf3 | coding | downstream | 873192 | 6802054 ~ 6853052 (+) |
| LOC118965594 | NA | coding | downstream | 921558 | 6850420 ~ 6853052 (+) |
| G667722 | NA | non-coding | upstream | 7995 | 5919624 ~ 5920360 (+) |
| G667720 | NA | non-coding | upstream | 11222 | 5912956 ~ 5917133 (+) |
| G667708 | NA | non-coding | upstream | 44623 | 5883357 ~ 5883732 (+) |
| G667688 | NA | non-coding | upstream | 87988 | 5839037 ~ 5840367 (+) |
| G667680 | NA | non-coding | upstream | 124665 | 5803483 ~ 5803690 (+) |
| G667768 | NA | non-coding | downstream | 54405 | 5983267 ~ 5983611 (+) |
| G667782 | NA | non-coding | downstream | 80487 | 6009349 ~ 6011476 (+) |
| G667812 | NA | non-coding | downstream | 115554 | 6044416 ~ 6044509 (+) |
| G668047 | NA | non-coding | downstream | 170654 | 6099516 ~ 6100449 (+) |
| G668059 | NA | non-coding | downstream | 192669 | 6121531 ~ 6121810 (+) |
| G666768 | NA | other | upstream | 356868 | 5570888 ~ 5571487 (+) |
| G666447 | NA | other | upstream | 1081836 | 4845405 ~ 4846519 (+) |
| G666341 | LOC106571028 | other | upstream | 1306575 | 4618977 ~ 4621780 (+) |
| LOC110529270 | zc3h14 | other | upstream | 1351321 | 4573303 ~ 4577034 (+) |
| G668043 | NA | other | downstream | 164483 | 6093345 ~ 6185271 (+) |
| G668334 | NA | other | downstream | 483138 | 6412000 ~ 6413087 (+) |
| G668368 | NA | other | downstream | 517018 | 6445880 ~ 6446445 (+) |
| G668649 | NA | other | downstream | 1042217 | 6971079 ~ 6971604 (+) |
| G668628 | NA | other | downstream | 1060992 | 6989854 ~ 7076589 (+) |
