G669657


Basic Information

Item Value
gene id G669657
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 8012738 ~ 8089556 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU762841
CAACATCCTCATGTCAGTTATGTACTCACAGGTAGTTGGCCAGGTTGTGCTCTTGTAAGGTGTGGGTCTCAAAGCCGTGGGGTGTCGTGTCAAAGTAGTCGTTTCCAATTCCACAGATGAAGCATTTAGTCTACAAGAGGATGGAATGTGTTAATCAGATACATTCCCCTTCCTTAACATATTAGCGTTTATTCAAGAGGATAAAATGTTCTGTTGTGAAGAATATGGAATCGTGTCAATGACTTAACAACAACAGAATAACATTGCTGTTTCCTAACATTGATACAGTAGGTTCTAGGTGAGACCAGGTGAACTCTCACCTCCAGACCAGGTGAACTCTCACCTCCAGACCAGGTGAACTCTCACCTCCAGACCAGGTGAACTCTTACCTCCAGACCAGGTGAACTCTTACCTCCATATCCTCCTTCACCTGCTCCTGCTGGTCTCTCAGTTCCCCAAACGCATCAATAATCAAACCTGGAGTATTGAATAAGACAGCATTTTAACTTCACATTTATTACACAGGAAAGCCTAGTCCTCTCGGCTGTTGTTTTAAACAGCAAGAAGCCAAATACAAATGGTTCCCAACCTGGGGTTCTGGTACCCCGGGGGTACCAatcctatccacagggggtattTGGGAAGACTCGTATGACTCATATCGTATGGAAAAACAATGTGATCGGAGGTACGGTAACCAAACAAGGATGAGAACCAGCGGCCTAGTAGATAACGTACCCTGGATGATGGCCAGGAGGATGACGAtgacgaagaagaagaaggtaATGTCGAAGAGGATACGCCACAGCTCGTAGGGGTCTCCGGCCGGGTCCTCGAGCTCATCACCGATACCACCGCCGGCCCTCACCCCCGCGTACAGGTGGAACAGATAGCACTGAGCAGGATATACAGGAGGAACAGATAGCACTGAGCAGGATATACAGGAGGAACAGATAGCACTGAGCAGGATATACAGGATGAGCAGATAGCACTGAGCAGGATATACaggaggaacagaggaacagatagCACTGAGCAGGATATACAGGAGGAACAGAGGATCAGATAGCACTGAGCAGGATATACAGGAGGAACAGAGGATCAGATAGCACTGAGCAGGGTATACAGGAGGAACAGAGGATCAGATAGCACTGAGCAGGATATACAGGAAGAACAGATAGCACTGAGCAGGATATACAGGAGGAACAGATAGCACTGAGGAGGATATACAGGAGGATCAGATAGCACTGAGCAGGATATACAGGAAGAACAGATAGCACTGAGCAAGATATACAGGAGGAACAGAGGATCAGATAGCACTGAGCAGGATATACAGGAGGAACAGAGGATCAGATAGCACTGAGCAGGATATACAGGAAGAACAGATAGCACTGAGCAGGATATACAGGAGGAACAGATAGCACTGAGCAGGATATACAGGAGGAACAGATAGCACTGAGCAGGATATACAGGAAGAACAGATAGCACTGAGCAAGATATACAGGAGGAACAGATAGCACTGAGCAGGATATACaggaggaacagaggaacagatagCACTGAGCATGATATACAGGAGGAACAGATAGCACTGAGGAGGATAAACAGGAGGAACAGATAGCACTGAGCAGGATATACAGGAGGAACAGATAGCACTGAGCAGGATATACAGGAGGAACAGATAGCACTGAGCAGGATATAGAGGAGGAGCAGATAGCACTGAGCAGGATATACAGGAGGAGCAGATAGCACTGAGCAGGATATACAGGAGGAACAGATAGCACTGAGCAGGATATACAGGAGGAACAGATAGCACTGAGCAGTATGTGTAGCAGTTTTTGGATTCCTTCCTACAACATGTTCTGTGAGTTGTGGAATTAACTCCAACCAAGCCATCTATTAGTGGCTGTGTATGGATTACGTACTCTTCCTCATGGCCCTGAGCAGCGCTCCGATGCCGTCGTACTGACGTCTCAGCAGGCTGAACATCACACGAACCAGCTCTGGGTCCTGGATGCTGCACTCCTGAGCCCAGCTAGCCATGGTCTGGCTGATCAACTCCTTCAGATTGGCTAGAGAGGAGATACCAAGAGTGTGTGTTATCTATTTAATCATACAGTAGTAACAGTTAACTCCTGAGCCCAGCTAGTCGTTGTCTGGCTGATCAACTACTTTAGATTggctagagaggagagaaagagattccAGTGTGTTAGTATATTAGCAGGGTCGTAGCTACAAA

Function

NR:

description
ryanodine receptor 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU762841 True 2242 lncRNA 0.47 9 8012738 8089556
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110529309 LOC106571095 coding upstream 77743 7929359 ~ 7934995 (+)
LOC110529308 LOC106571096 coding upstream 89114 7913950 ~ 7923624 (+)
gpr176 LOC106571060 coding upstream 475809 7515258 ~ 7536929 (+)
LOC110529173 LOC106571059 coding upstream 515599 7476858 ~ 7497139 (+)
LOC118965596 NA coding upstream 629166 7382121 ~ 7383572 (+)
LOC110529313 LOC106571113 coding downstream 194324 8283880 ~ 8341125 (+)
LOC110529318 LOC106571115 coding downstream 295894 8385450 ~ 8393449 (+)
LOC100136137 LOC106571105 coding downstream 312668 8402224 ~ 8423584 (+)
LOC110529321 LOC106571114 coding downstream 652983 8742539 ~ 8757466 (+)
LOC110529326 LOC106571110 coding downstream 815033 8904589 ~ 8914229 (+)
G669687 NA non-coding upstream 294 8010077 ~ 8012444 (+)
G669646 NA non-coding upstream 72575 7939937 ~ 7940163 (+)
G669642 NA non-coding upstream 84277 7928069 ~ 7928461 (+)
G669641 NA non-coding upstream 84778 7927059 ~ 7927960 (+)
G669788 NA non-coding downstream 88800 8178356 ~ 8178806 (+)
G669814 NA non-coding downstream 136288 8225844 ~ 8226088 (+)
G669988 NA non-coding downstream 168630 8258186 ~ 8258595 (+)
G670000 NA non-coding downstream 182484 8272040 ~ 8272930 (+)
G670004 NA non-coding downstream 191207 8280763 ~ 8280966 (+)
G668626 NA other upstream 1013432 6998228 ~ 6999306 (+)
G668628 NA other upstream 1021130 6989854 ~ 7076589 (+)
G668649 NA other upstream 1041134 6971079 ~ 6971604 (+)
G668368 NA other upstream 1566293 6445880 ~ 6446445 (+)
G668334 NA other upstream 1599651 6412000 ~ 6413087 (+)
G670034 NA other downstream 280568 8370124 ~ 8376409 (+)
G670169 NA other downstream 377159 8466715 ~ 8467460 (+)
G670939 LOC106571120 other downstream 1204939 9294495 ~ 9352851 (+)
LOC110529331 LOC106571120 other downstream 1263367 9336069 ~ 9366106 (+)
G670992 NA other downstream 1436167 9498702 ~ 9613040 (+)

Expression

G669657 Expression in all Baseline Samples

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G669657 Expression in each Bioproject

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G669657 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 20.
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Co-expression Network