Gene
RNA
| Item | Value |
|---|---|
| gene id | G670939 |
| gene name | LOC106571120 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 9294495 ~ 9352851 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| tumor necrosis factor alpha-induced protein 2-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU764316 | False | 640 | TUCP | 0.51 | 3 | 9294495 | 9352851 |
| TU764317 | False | 560 | TUCP | 0.53 | 4 | 9295168 | 9352851 |
| TU764318 | True | 422 | TUCP | 0.53 | 2 | 9348639 | 9352851 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529329 | NA | coding | upstream | 31097 | 9260370 ~ 9263398 (+) |
| LOC118965491 | NA | coding | upstream | 36792 | 9253411 ~ 9257703 (+) |
| LOC110531071 | NA | coding | upstream | 41219 | 9251747 ~ 9253276 (+) |
| LOC110529327 | LOC106571118 | coding | upstream | 80841 | 9201189 ~ 9213654 (+) |
| LOC110529324 | LOC106571110 | coding | upstream | 320926 | 8951976 ~ 8973569 (+) |
| LOC110529332 | LOC106571122 | coding | downstream | 30236 | 9383087 ~ 9384819 (+) |
| LOC110529333 | LOC106571123 | coding | downstream | 35123 | 9387974 ~ 9398791 (+) |
| LOC110529179 | LOC106571124 | coding | downstream | 58521 | 9411372 ~ 9523043 (+) |
| LOC110529338 | LOC106571128 | coding | downstream | 619230 | 9972081 ~ 9979621 (+) |
| LOC110529340 | NA | coding | downstream | 690327 | 10043178 ~ 10046513 (+) |
| G670914 | NA | non-coding | upstream | 18415 | 9275825 ~ 9276080 (+) |
| G670890 | NA | non-coding | upstream | 27057 | 9267184 ~ 9267438 (+) |
| G670888 | NA | non-coding | upstream | 28485 | 9265790 ~ 9266010 (+) |
| G670886 | NA | non-coding | upstream | 29077 | 9265162 ~ 9265418 (+) |
| G670887 | NA | non-coding | upstream | 30060 | 9264212 ~ 9264435 (+) |
| G670981 | NA | non-coding | downstream | 39941 | 9392792 ~ 9393267 (+) |
| G671024 | NA | non-coding | downstream | 103086 | 9455937 ~ 9457324 (+) |
| G671028 | NA | non-coding | downstream | 108009 | 9460860 ~ 9461198 (+) |
| G671002 | NA | non-coding | downstream | 125443 | 9478294 ~ 9479092 (+) |
| G671044 | NA | non-coding | downstream | 144850 | 9497701 ~ 9498165 (+) |
| G670169 | NA | other | upstream | 827035 | 8466715 ~ 8467460 (+) |
| G670034 | NA | other | upstream | 918086 | 8370124 ~ 8376409 (+) |
| G668626 | NA | other | upstream | 2295189 | 6998228 ~ 6999306 (+) |
| G668628 | NA | other | upstream | 2302887 | 6989854 ~ 7076589 (+) |
| G668649 | NA | other | upstream | 2322891 | 6971079 ~ 6971604 (+) |
| LOC110529331 | LOC106571120 | other | downstream | 72 | 9336069 ~ 9366106 (+) |
| G670992 | NA | other | downstream | 172872 | 9498702 ~ 9613040 (+) |
| G671542 | LOC106571127 | other | downstream | 496659 | 9849510 ~ 9851825 (+) |
| LOC110529360 | eva1a | other | downstream | 1689493 | 10936067 ~ 11128126 (+) |
| G673590 | NA | other | downstream | 2580830 | 11933681 ~ 11939152 (+) |
