G671024


Basic Information

Item Value
gene id G671024
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 9455937 ~ 9457324 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU764418
TATAGAGCGAGGTGGTTGGATATAGAGAGAGatggttggatatagagagagatggttggataTAGAGCGAGATGGTTGGATATAGAGTGTCACATGGAAGATGAGCAAAGTCTCATGTAGAGGTAGACAAAGACTGCAGAGGTCAGAGAaacggagggaggaagaggaaggagtcATTGATCAGGTGAGTCAGTTAAGTGTGAATTTTGAAAGCAGCTaacaacaccagggttgtgtgttgactgtgttcaAAGCCCATACTTACTGTGGGTCCTCTCAAGTCCTGTTAGGCCTTACAAGGGAATGTACAGTAAAGCAATTTTAAGTTAGAATTcaattgagttcaaataacatgGAATGTACTCCCATGTGAAATGCACGAATAGACTGAGTGGTTTCTCTCTGTACTTGTTCTTCAGTCCTTTCCCAGGTTCATTAGGCTAATGGATCGTTTAATGCTGGTGTCTACTGACGTAGAAATGgacagactgaaggagagggcgagggagagaggcagatacagtgccttcagaaagtattcacaccaattgtatttttccacattttgttgtgttacaattgtgggattaaaattgatttcaaagtggaagaaacattttaacatctgtaaaaaaaatatatataaaaaaaaaatgaatgaaaaataaaacactgtcttgattagataaatattcaaccccctgagtcaatacatgttagaatcacctttggcagcaattacagctgtgggtctttttttgggtaagtctctaagagctttgcacacctggactgTACAATATTTTCACATTTATAATTGTTTTAATTCTTCAAGGTCggccaagttggttgttgatcaataCTTGACAGCCGTTTTaagccatagattttcaagtagatttcaATATTGTAACTagcccactcaggaacattcaatgtcgtcttggtaagcaactgcagtatatatttggcctgctgaaaggtgaatttgtctccaaaAGTCTattggaacgcagactgaacCTAAgtcttcctctaggattttgcctgtgcttggcTCTATTCAGTTTACGTTTTATCATatactccctagtccttgccgaagacaagcatacccataacatgaggcagccaccaccatgcttgaaaatatgaagagtgggaCTCTTATGAATATGAAGagtgatgtgttgttggatttgtccccaaacataatgctttgtattca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU764418 True 1228 lncRNA 0.39 2 9455937 9457324
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110529333 LOC106571123 coding upstream 57146 9387974 ~ 9398791 (+)
LOC110529332 LOC106571122 coding upstream 71118 9383087 ~ 9384819 (+)
LOC110529331 LOC106571120 coding upstream 89831 9336069 ~ 9366106 (+)
LOC110529330 LOC106571119 coding upstream 138246 9294458 ~ 9317691 (+)
LOC110529329 NA coding upstream 192539 9260370 ~ 9263398 (+)
LOC110529338 LOC106571128 coding downstream 514757 9972081 ~ 9979621 (+)
LOC110529340 NA coding downstream 585854 10043178 ~ 10046513 (+)
LOC110529342 LOC106571129 coding downstream 615665 10072989 ~ 10079323 (+)
zbtb1 LOC106571130 coding downstream 629602 10086926 ~ 10091942 (+)
LOC110529345 LOC106571132 coding downstream 639191 10096515 ~ 10111864 (+)
G670981 NA non-coding upstream 62670 9392792 ~ 9393267 (+)
G670914 NA non-coding upstream 179857 9275825 ~ 9276080 (+)
G670890 NA non-coding upstream 188499 9267184 ~ 9267438 (+)
G670888 NA non-coding upstream 189927 9265790 ~ 9266010 (+)
G670886 NA non-coding upstream 190519 9265162 ~ 9265418 (+)
G671028 NA non-coding downstream 3536 9460860 ~ 9461198 (+)
G671002 NA non-coding downstream 20970 9478294 ~ 9479092 (+)
G671044 NA non-coding downstream 40377 9497701 ~ 9498165 (+)
G670992 NA non-coding downstream 41378 9498702 ~ 9613040 (+)
G671064 NA non-coding downstream 88596 9545920 ~ 9547212 (+)
G670939 LOC106571120 other upstream 103086 9294495 ~ 9352851 (+)
G670169 NA other upstream 988477 8466715 ~ 8467460 (+)
G670034 NA other upstream 1079528 8370124 ~ 8376409 (+)
G668626 NA other upstream 2456631 6998228 ~ 6999306 (+)
G671542 LOC106571127 other downstream 392186 9849510 ~ 9851825 (+)
LOC110529360 eva1a other downstream 1585020 10936067 ~ 11128126 (+)
G673590 NA other downstream 2476357 11933681 ~ 11939152 (+)
LOC118965493 LOC106607564 other downstream 2571578 12028902 ~ 12035474 (+)

Expression

G671024 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.25.
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G671024 Expression in each Bioproject

Bar chart with 18 bars.
G671024 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 60.
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Co-expression Network