G671879



Basic Information


Item Value
gene id G671879
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 10151257 ~ 10151979 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU765402
CATAAGAACCTCTGTTAAATGATCAAATACGTATACAAGTCATTGCCATTCAGGTGAGATCATCGATGTCCTAACTATTCACAGGATACCCAGGATTTCTTTaattttgaaaaaaaaatgtatcatgtgttttgtgaccaagctttctGTGACCGTCATTACACCTTATCATGGCATCTTTTAATGTGATGAAAAGCACAAAATGATGGTATGAGTGACAAAGTGTTTCACAGAGTTTAAATAATTGCGGTTATTTTCTACAACACACACTATGCCAATGTAAAATAAGTGACTGAAAGGCTTCCCAGAGGGATCTGTGTGAACCTGCCTTATTTTTAATGAGTAAGACATATGGAAATCTTGTTGAAAAAAAGGATGACAAACAAAGTTTCCGGTAGCAAACAACCCTGTGAATTTCAGCGTCACTCAGTTTTCACCTACATAATGTGCGATGACGTTTGCAATGAAAACCCCTTTCGGTCATTTCGAAAAGATTTTCATCACTTATAAAAGCATGACAAATTGGATGAATAAATCAAATAGATGGATAGAGATAAAGATATTCAATATGTTTCCTTAACAATAGTTTTCGTAATTACAAATGAAATAGCATGTCAGTTATTGTTTACAGCACAAAACTGGAACACAGTAATGTAACACGTGATTGCGTAAGAGCAGTTAAGCTGGCACTGCAGCTTTTCATAGCACTTTTAACACAGccat

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU765402 True 723 lncRNA 0.35 1 10151257 10151979

Neighbor


gene id symbol gene type direction distance location
myh6 LOC102786665 coding downstream 2674 10140669 ~ 10148583 (-)
LOC110529344 LOC106571131 coding downstream 64847 10080837 ~ 10086410 (-)
kif26aa LOC106571127 coding downstream 157805 9825982 ~ 10013023 (-)
LOC118965597 NA coding downstream 360188 9774005 ~ 9791069 (-)
LOC110529336 LOC106571151 coding downstream 501177 9644525 ~ 9650080 (-)
LOC110529348 LOC106571135 coding upstream 816 10152795 ~ 10191112 (-)
LOC110529349 NA coding upstream 42871 10194850 ~ 10212544 (-)
LOC110529351 LOC106571138 coding upstream 66641 10218620 ~ 10232963 (-)
mycn LOC106571147 coding upstream 634227 10786206 ~ 10792867 (-)
mrpl19 mrpl19 coding upstream 769612 10921591 ~ 10932463 (-)
G671874 NA non-coding downstream 13735 10137298 ~ 10137522 (-)
G671873 NA non-coding downstream 14097 10136710 ~ 10137160 (-)
G671872 NA non-coding downstream 15962 10134788 ~ 10135295 (-)
G671871 NA non-coding downstream 17473 10133374 ~ 10133784 (-)
G671870 NA non-coding downstream 18106 10132431 ~ 10133151 (-)
G671925 NA non-coding upstream 94201 10246180 ~ 10246388 (-)
G671927 NA non-coding upstream 102724 10254703 ~ 10254927 (-)
G671938 NA non-coding upstream 114620 10266599 ~ 10267809 (-)
G672120 NA non-coding upstream 138282 10290261 ~ 10290472 (-)
G672122 NA non-coding upstream 142534 10294513 ~ 10294712 (-)
G671820 NA other downstream 29284 10034772 ~ 10121973 (-)
G671122 NA other downstream 803378 9346384 ~ 9347879 (-)
G670905 NA other downstream 886164 9263850 ~ 9265093 (-)
G670733 LOC107575789 other downstream 1189526 8949694 ~ 8961731 (-)
G672436 LOC107575789 other upstream 586245 10738224 ~ 10738686 (-)
G673053 NA other upstream 1192494 11344473 ~ 11344782 (-)
LOC110529377 LOC106571175 other upstream 1832855 11984834 ~ 11997491 (-)
G673863 NA other upstream 1866637 12018616 ~ 12025742 (-)
G673867 NA other upstream 1988391 12140370 ~ 12141994 (-)

Expression



Co-expression Network