G671938



Basic Information


Item Value
gene id G671938
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 10266599 ~ 10267809 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU765463
CCcggaggagggaggtatagacAGGTTCTAACTCCcggaggagggaggtatagacAGGTTCTAACTCCCGGAGGAGggaggtatagacAGGTTCTAACTCCCGGAGGAGGTATAGACAGGTTCTAACTCCCGGAGGAGGTATAGACGGGTTCTTACCGGACTCACTTTCCTCTTCCTCGTAGCGTTCAAACATTCCCCTTGCAAACACGTCATGTTCTAGAGAAAAAGACACCCAGCCATTAAGAATAAACGCTTCATGCTGCGTGACCTCAAAGCCTTTGAAAACATTTGCTTGACCACACAGAGACTTAAAGGAGACAGACCTGCAATAAATACAGCAGATCAAAATAGCACTACGTTGAACAATACAGTTGCAGGTAGAACTACCATAAATAGAACTGACATGATTCCTTCCTCTACATGTCGATGAAGCGGATCAgttgaaaataatattttaacATCTGAACATTCCATAACATTTTGCTGAACGCAGCCCTAAACTGTAGCTCAGTTGTTCAGAGTGTCTCGAAGTAGGAGTActgatttttattttatctttatttaactagacaagtcagttaagaacaaattattattttcaatgatggcctaggaacagtgggttaactgccttgttcagggcagattttttaccttgtcagctcggggattcgatcttgcatcctttcggttactagaccaacactctaacccctaggctacctgccgcccaggatctaggatcaggtcctcctaaTCTTAaatcattatgatctaaaaggctaaactgatcctagtccaGCACTCTTACTCAGATGGAATACAGGCCTAGAGTTCTGTACCAGTCACGCCCTTGCAGGTCTCTTTGCAGCTCTCCTCCACGTCAAAGTTGTTGTCATTGCCGTCACAGCCACCGTATGTGAAGCGATTGCACTTCCTGTTGAGCGGGTCATAGTACCAGTGGGAGTGGCTGGCGCGGCATGGCCCCGTCCTGGGGGGCTCGGTGCAGCGGgctgagagagagcaaaagacagacagagatgtgATAAAGGTATTGTCCACTACAGGACTGTGTGGGCTGGATACTTGGGTTGTGACTGTAGTAAGGGAACTAGGATTGGGCAAGGCATCTAGGGCTGGGACTATACTAAGCACACTAGCGTTGTCACTGGTAAATACGCT

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU765463 True 1182 lncRNA 0.47 2 10266599 10267809

Neighbor


gene id symbol gene type direction distance location
LOC110529351 LOC106571138 coding downstream 33636 10218620 ~ 10232963 (-)
LOC110529349 NA coding downstream 54055 10194850 ~ 10212544 (-)
LOC110529348 LOC106571135 coding downstream 75487 10152795 ~ 10191112 (-)
myh6 LOC102786665 coding downstream 118016 10140669 ~ 10148583 (-)
LOC110529344 LOC106571131 coding downstream 180189 10080837 ~ 10086410 (-)
mycn LOC106571147 coding upstream 518397 10786206 ~ 10792867 (-)
mrpl19 mrpl19 coding upstream 653782 10921591 ~ 10932463 (-)
LOC110529363 tram2 coding upstream 880299 11148108 ~ 11162069 (-)
LOC110529362 LOC106571157 coding upstream 894625 11162434 ~ 11184353 (-)
LOC110529181 LOC106571156 coding upstream 917928 11185737 ~ 11210434 (-)
G671927 NA non-coding downstream 11672 10254703 ~ 10254927 (-)
G671925 NA non-coding downstream 20211 10246180 ~ 10246388 (-)
G671879 NA non-coding downstream 114620 10151257 ~ 10151979 (-)
G671874 NA non-coding downstream 129077 10137298 ~ 10137522 (-)
G671873 NA non-coding downstream 129439 10136710 ~ 10137160 (-)
G672120 NA non-coding upstream 22452 10290261 ~ 10290472 (-)
G672122 NA non-coding upstream 26704 10294513 ~ 10294712 (-)
G672158 NA non-coding upstream 76830 10344639 ~ 10345209 (-)
G672143 NA non-coding upstream 124750 10392559 ~ 10394230 (-)
G672198 NA non-coding upstream 139141 10406950 ~ 10441539 (-)
G671820 NA other downstream 144626 10034772 ~ 10121973 (-)
kif26aa LOC106571127 other downstream 293787 9825982 ~ 10013023 (-)
G671122 NA other downstream 918720 9346384 ~ 9347879 (-)
G670905 NA other downstream 1001506 9263850 ~ 9265093 (-)
G670733 LOC107575789 other downstream 1304868 8949694 ~ 8961731 (-)
G672436 LOC107575789 other upstream 470415 10738224 ~ 10738686 (-)
G673053 NA other upstream 1076664 11344473 ~ 11344782 (-)
LOC110529377 LOC106571175 other upstream 1717025 11984834 ~ 11997491 (-)
G673863 NA other upstream 1750807 12018616 ~ 12025742 (-)
G673867 NA other upstream 1872561 12140370 ~ 12141994 (-)

Expression



Co-expression Network