G672436 (LOC107575789)



Basic Information


Item Value
gene id G672436
gene name LOC107575789
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 10738224 ~ 10738686 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU766004
ggtgtcttttatacaggcaacgagctgagattaggagcacactcttaaagggagtgctcctaatctcagtttgttacctgtataaaatacacctgtccacagaagcaatcaatcaatcagattccaaactctccaccatggccaagaccaaagagctctccaaggatgtcagggacaagattgtagatgTACACagggctggaatgggctacaagaccatcgacaagcagcttggtgagaaggtgacaacagttggtgtgattattcgcaaatggaagaaacacaaaagaactgtcaatctccctcggcctggggctccatgcaagatctcacctcgtggagttgcaatgatcatgagaacggtgaggaatcagcccagaactacatgggaggatcttgtcaatgatctcaaggcagctagGACAATattcaccaagaaaacaattggtaacacactatgccg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU766004 True 463 TUCP 0.46 1 10738224 10738686

Neighbor


gene id symbol gene type direction distance location
LOC110529351 LOC106571138 coding downstream 505261 10218620 ~ 10232963 (-)
LOC110529349 NA coding downstream 525680 10194850 ~ 10212544 (-)
LOC110529348 LOC106571135 coding downstream 547112 10152795 ~ 10191112 (-)
myh6 LOC102786665 coding downstream 589641 10140669 ~ 10148583 (-)
LOC110529344 LOC106571131 coding downstream 651814 10080837 ~ 10086410 (-)
mycn LOC106571147 coding upstream 47520 10786206 ~ 10792867 (-)
mrpl19 mrpl19 coding upstream 182905 10921591 ~ 10932463 (-)
LOC110529363 tram2 coding upstream 409422 11148108 ~ 11162069 (-)
LOC110529362 LOC106571157 coding upstream 423748 11162434 ~ 11184353 (-)
LOC110529181 LOC106571156 coding upstream 447051 11185737 ~ 11210434 (-)
G672429 NA non-coding downstream 8623 10729386 ~ 10729601 (-)
G672426 NA non-coding downstream 9558 10728464 ~ 10728666 (-)
G672423 NA non-coding downstream 11590 10726114 ~ 10726634 (-)
G672395 NA non-coding downstream 36987 10701004 ~ 10701237 (-)
G672383 LOC107676188 non-coding downstream 47711 10690247 ~ 10690513 (-)
G672639 NA non-coding upstream 7726 10746412 ~ 10746682 (-)
G672660 NA non-coding upstream 59007 10797693 ~ 10798481 (-)
G672728 NA non-coding upstream 191186 10929872 ~ 10930808 (-)
G672745 NA non-coding upstream 212729 10951415 ~ 11003315 (-)
G672754 NA non-coding upstream 229877 10968563 ~ 10972832 (-)
G671820 NA other downstream 616251 10034772 ~ 10121973 (-)
kif26aa LOC106571127 other downstream 765412 9825982 ~ 10013023 (-)
G671122 NA other downstream 1390345 9346384 ~ 9347879 (-)
G670905 NA other downstream 1473131 9263850 ~ 9265093 (-)
G670733 LOC107575789 other downstream 1776493 8949694 ~ 8961731 (-)
G673053 NA other upstream 605787 11344473 ~ 11344782 (-)
LOC110529377 LOC106571175 other upstream 1246148 11984834 ~ 11997491 (-)
G673863 NA other upstream 1279930 12018616 ~ 12025742 (-)
G673867 NA other upstream 1401684 12140370 ~ 12141994 (-)
G674015 NA other upstream 1545151 12283837 ~ 12284220 (-)

Expression



Co-expression Network