G672832 (eva1a)


Basic Information

Item Value
gene id G672832
gene name eva1a
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 11127242 ~ 11129081 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU766448
aaaaaaaaacacattttgagttCAAAGTTTAAAAGGCAGCGTCGGTTGAACGTGGTCATTTCCCTCTTAAGTGTTACGCtgtacatttcactgtaagtgcTATGCCTCTCCGAAAAACCATTCACCCATTTAAATACTGAAGGGTGAGTGAGCATGAAGCAAGCTGCCCAATTCTCAGTATCCACTAGGCAACAGTGGAGTAACATTAGCAACTGTCCTTAAATCACCTTTCAGGCTTTACAGCCTAAGTATCCCAAGATCCTCCACTTTAGAAGGGTGTGAGGAGGTCAAATGCGAGGCTGTGCAGTTAAATGACCTTCCACCTTCAGCCTCCACCAATGACTGGCGGGCTCCGGTCGAGCTTACCATGCTGAGAAGGAGGAGCTTATTCTCACTGCAAAAATAGAGGGGTCTTTACTCTATACCAAGGCtgaccaaccctcttcctggagatctaccatcctgttggttttcagtccaaccctcttcctggagatctaccgccctgttggttttcagtccaaccctcttcctggagatcttaccgtcctgttggttttcagtccaaccctcttcctggaaaTCTACCGTCCTGTTgtttttcagtccaaccctcttcctggagatctaccgtcctgttgGTTTTCAGTCAACCCTCATCCTGGAGATCTACTGCCCTgttggttttcagtccaaccctaatttaacacacctgattctactaattagctgctcaacaagatcttaactagctgaatcagatacGCTGGaccgaaaacctacaggacagtagagctccaggaagagggttggactgaaaacctactacatgacagtagatctccaggaagagggttggactgaaaacctactacaggacagtagatctccaggaagagggttggactgaaaacctactacaggacagtttgtctccaggaagagggttggactgaaaacctacaggacagtaggtctccaggaagagggttggactgaaaagcTACAGGACAGTAggtctccaggaagagggttggactgaaaaccaacaggacagtaggtctccaggaatagggttggaCAGCCCTGGTCTAGAGTACCCACATGgtcacagacagactgacagagggaGATACCCAGACAGAGGGTTCCAAACCTTCGCAGGTCCCCGTCAGGTCATGGGGCCCCATTCCCAAAACCCAGAGGTCCATTTGTGGTCCTACACATCCCATCTCAAGTACTGCGCTCCAACcttcacagccccccccccccccccccccccatttctagATCTAGTAGAGGTTCCTTTACGGTCCTGCCTCAGTAGTAGCGGTTGAGGCTGCGCGTCCCGGGTTCATCTAGATCTAGTAGAGGTTACTTTACGGTCCTGCCTCAGTAGTAGCGGTTGAGGCTGCGCGTCCCGGGTATGTCCGGCTGACCGTTCATCCAGATCTCTCGTatgatcctctccctctcctccagccgCTGAGCACGCTCCAGCTCCTCCACTGATGTGAACACATTCATGTTGAGAGTGCGCTCGAAACGGCGGTGGCGGCGGGCCGACAGGTCTGACGTGGTGTCCGAGTCAGAGTCTCTGGAGTCGGATGAGGAGTCGGAGGGCCGCGGACGCTTCTTGGTGGTGGTGCCGGGGCGACGGCGGGGTTGGCAGTCGGTGCGGCATGAGATCTGGACGACCAGAGCAAAGAGGGTAAAGAAGAGGCCCAGGCACACGCCACACAGGAAGTAGAGAGCTGCACGCTCTGGG

Function

symbol description
eva1a Predicted to act upstream of or within apoptotic process and autophagy. Predicted to be located in endoplasmic reticulum membrane and lysosomal membrane. Predicted to be integral component of membrane. Orthologous to human EVA1A (eva-1 homolog A, regulator of programmed cell death).

NR:

description
protein eva-1 homolog A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU766448 True 1768 lncRNA 0.52 2 11127242 11129081

Neighbor

gene id symbol gene type direction distance location
mrpl19 mrpl19 coding downstream 194779 10921591 ~ 10932463 (-)
mycn LOC106571147 coding downstream 334375 10786206 ~ 10792867 (-)
LOC110529351 LOC106571138 coding downstream 894279 10218620 ~ 10232963 (-)
LOC110529349 NA coding downstream 914698 10194850 ~ 10212544 (-)
LOC110529348 LOC106571135 coding downstream 936130 10152795 ~ 10191112 (-)
LOC110529363 tram2 coding upstream 19027 11148108 ~ 11162069 (-)
LOC110529362 LOC106571157 coding upstream 33353 11162434 ~ 11184353 (-)
LOC110529181 LOC106571156 coding upstream 56656 11185737 ~ 11210434 (-)
LOC110529367 LOC105021682 coding upstream 226264 11355345 ~ 11520698 (-)
LOC118965492 LOC106560407 coding upstream 617974 11747055 ~ 11764400 (-)
G672810 NA non-coding downstream 53217 11073394 ~ 11074025 (-)
G672745 NA non-coding downstream 123927 10951415 ~ 11003315 (-)
G672754 NA non-coding downstream 154410 10968563 ~ 10972832 (-)
G672755 NA non-coding downstream 155231 10968692 ~ 10972011 (-)
G672728 NA non-coding downstream 196434 10929872 ~ 10930808 (-)
G672831 NA non-coding upstream 235 11129316 ~ 11130400 (-)
G672845 NA non-coding upstream 15660 11144741 ~ 11144988 (-)
G672846 NA non-coding upstream 17552 11146633 ~ 11146897 (-)
G672881 NA non-coding upstream 50211 11179292 ~ 11179502 (-)
G672436 LOC107575789 other downstream 388556 10738224 ~ 10738686 (-)
G671820 NA other downstream 1005269 10034772 ~ 10121973 (-)
kif26aa LOC106571127 other downstream 1154430 9825982 ~ 10013023 (-)
G671122 NA other downstream 1779363 9346384 ~ 9347879 (-)
G670905 NA other downstream 1862149 9263850 ~ 9265093 (-)
G673053 NA other upstream 215392 11344473 ~ 11344782 (-)
LOC110529377 LOC106571175 other upstream 855753 11984834 ~ 11997491 (-)
G673863 NA other upstream 889535 12018616 ~ 12025742 (-)
G673867 NA other upstream 1011289 12140370 ~ 12141994 (-)
G674015 NA other upstream 1154756 12283837 ~ 12284220 (-)

Expression


Co-expression Network