G673867


Basic Information

Item Value
gene id G673867
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 12140370 ~ 12141994 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU767588
TTTCTGACGACATTGCCTAAAGCAAACATGATGGGCTTGCTCTGTTTGTACTGAGCCATGCTGAGCATGTCTTTGACAAGGAGGCGGGAGGGGTTGGGCAGGAGTCCCAGGGCATAGACGGCGGCGTCGACTTCCATAGCTTCAGGCTCGAAGGTCCTGAGGTGCTGGAGCATGGCGCTGCTACACTCAGGAGTACCGCACTGGGCCAGGGCCTGCCAGGTCAGGGCGTCCGATACGAACACCATCTCAGGGACGGCAGGGCTCATAGCCTCACCCTTCAGTCCCCGGAGCTCAGACACAAGTCTCTGGAAGGTGCTGGCGCGCTGGTGGCCCTGGTTGGTCTCGGACAGGGTGCTCAGTTCCCTCAGGGTGGCAAGAGCAGCATCTGCTGTCTGGACGGCAGCTTtgtcctcagcagcctccatggGTAAACCCTTGAGGTTGGCCTCATCTTTAGAGGGTAAGATAGAAGACATTTAGTTTTAAAGGTCATTCTGTAAAGGCTGCCTGGTACAGTACACATTCTGTTTATCATTTGAGTAAAATACAAATTTTGACCAGTGTCAATTCTTACTGTGGTTGAAAACTCTTTCGTTGATCTTGCTAGTCTCCAGGAGAGTCAAAGTCTGTTTGACCAGTGTTGACACTCCATACTCAGTCCTGCATTTAGGAAGAGGATTGAAGAACATGTGACGAATTCTAAACTGCCCTGGGTAAAATCTGGGCTAACATCATTGCAGACTCAGTATTCCATTCATAGGATTAAACAGATTTGAAGTTGCCTGGATTTACTGGTGGGAGAAAGGCAGGAAGATGTGCTTCTCCGTGCAGGATCCAGCAGTCATGTGCTTCTTCTGGTTGTCAAACTTGTAGTTGCAAGTCTGGGTGCTGCTGATCAGCTTGGACAGTGGGTATTGCTGTTGACAGGGAAGCACAATTAAACACTGTCAGGAACAATAATCATGATGGGTTTATGGTGTAAATCAAGGTTCCCCAACTGACGTGATTTTATTTGTCCCCtcaagtactttttttttttttaagtaaaaaaagttagttatatattttttaattgttgGCCATAAAAGactaaaaatgtgattttaagtgattttaatttgggaAATCTGCTCCAAAGTATTTCCAACAATAATAGAGAGATATGTGAATGTGTACAAATGTAAGCAATGatgatgttttagtcaaatattttaATCTGTTTGGGCATCTTGCGGTAAATTTGCAGTCAACAAATTATCTGCAATTATGTTCGGGCCCCgtgaccatccactcaagaagaAAATTGGCCCGTGGCTGAATTTATGATGTGATATTCTATTAAAATGTAATGCTTAATCGAAGAATGACcaaatgttAAAGTTCTCTTTTTGCACATTTCCCCTCCCTCTAACCATGCCAGAGATGATAGCCAGGGGGCTGGTGTGGTCCCTCTGGGCAATGAAGCTGTCGCATTTGGACAGGTCCCTGGTGATGGTCACGTCAGTGGCGATGTCTTCTTTGGAATTGACAGCGAAGTTGGTGCCACAGACTCCATGAAGGGTGGCCTGAACGTTGAGAGAGTTTTTGTTAAAGTAAATGACGAAC

Function

NR:

description
apolipoprotein B-100-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU767588 True 1605 TUCP 0.45 2 12140370 12141994

Neighbor

gene id symbol gene type direction distance location
LOC110529379 hpcl1 coding downstream 111061 12026183 ~ 12029309 (-)
LOC110529184 LOC106571176 coding downstream 124624 12013722 ~ 12015746 (-)
LOC110529377 LOC106571175 coding downstream 149849 11984834 ~ 11997491 (-)
LOC110529372 NA coding downstream 254521 11883060 ~ 11914200 (-)
LOC110529371 LOC106571168 coding downstream 300373 11828959 ~ 11839997 (-)
LOC110529387 rhob coding upstream 19779 12161773 ~ 12163688 (-)
mideasa LOC106571189 coding upstream 174612 12315015 ~ 12330035 (-)
churc1 churc1 coding upstream 203913 12345907 ~ 12348688 (-)
capn3b can3 coding upstream 232867 12371350 ~ 12412260 (-)
si:dkey-12h9.6 LOC106571193 coding upstream 297984 12439978 ~ 12457014 (-)
G673811 NA non-coding downstream 155685 11984099 ~ 11984685 (-)
G673887 NA non-coding downstream 174258 11965847 ~ 11966112 (-)
G673787 NA non-coding downstream 290663 11848865 ~ 11849707 (-)
G673941 NA non-coding upstream 13602 12155596 ~ 12155883 (-)
G673942 NA non-coding upstream 14177 12156171 ~ 12156395 (-)
G673943 NA non-coding upstream 63056 12205050 ~ 12210248 (-)
G673966 NA non-coding upstream 68648 12210642 ~ 12210867 (-)
G673866 NA non-coding upstream 74841 12216835 ~ 12224401 (-)
G673863 NA other downstream 114628 12018616 ~ 12025742 (-)
G673053 NA other downstream 795588 11344473 ~ 11344782 (-)
G672436 LOC107575789 other downstream 1401684 10738224 ~ 10738686 (-)
G671820 NA other downstream 2018397 10034772 ~ 10121973 (-)
G674015 NA other upstream 141843 12283837 ~ 12284220 (-)
lpgat1 lpgat1 other upstream 473886 12615879 ~ 12697323 (-)
LOC110529426 NA other upstream 1232945 13373030 ~ 13451428 (-)
G675413 NA other upstream 1342099 13484093 ~ 13484934 (-)
G675415 NA other upstream 1343685 13485679 ~ 13486137 (-)

Expression


Co-expression Network