Gene
RNA
| Item | Value |
|---|---|
| gene id | G673942 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 12156171 ~ 12156395 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU767672 | True | 225 | lncRNA | 0.39 | 1 | 12156171 | 12156395 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529379 | hpcl1 | coding | downstream | 126862 | 12026183 ~ 12029309 (-) |
| LOC110529184 | LOC106571176 | coding | downstream | 140425 | 12013722 ~ 12015746 (-) |
| LOC110529377 | LOC106571175 | coding | downstream | 165650 | 11984834 ~ 11997491 (-) |
| LOC110529372 | NA | coding | downstream | 270322 | 11883060 ~ 11914200 (-) |
| LOC110529371 | LOC106571168 | coding | downstream | 316174 | 11828959 ~ 11839997 (-) |
| LOC110529387 | rhob | coding | upstream | 5378 | 12161773 ~ 12163688 (-) |
| mideasa | LOC106571189 | coding | upstream | 160211 | 12315015 ~ 12330035 (-) |
| churc1 | churc1 | coding | upstream | 189512 | 12345907 ~ 12348688 (-) |
| capn3b | can3 | coding | upstream | 218466 | 12371350 ~ 12412260 (-) |
| si:dkey-12h9.6 | LOC106571193 | coding | upstream | 283583 | 12439978 ~ 12457014 (-) |
| G673941 | NA | non-coding | downstream | 288 | 12155596 ~ 12155883 (-) |
| G673811 | NA | non-coding | downstream | 171486 | 11984099 ~ 11984685 (-) |
| G673887 | NA | non-coding | downstream | 190059 | 11965847 ~ 11966112 (-) |
| G673943 | NA | non-coding | upstream | 48655 | 12205050 ~ 12210248 (-) |
| G673966 | NA | non-coding | upstream | 54247 | 12210642 ~ 12210867 (-) |
| G673866 | NA | non-coding | upstream | 60440 | 12216835 ~ 12224401 (-) |
| G673944 | NA | non-coding | upstream | 73667 | 12230062 ~ 12231219 (-) |
| G673988 | NA | non-coding | upstream | 94468 | 12250863 ~ 12251149 (-) |
| G673867 | NA | other | downstream | 14177 | 12140370 ~ 12141994 (-) |
| G673863 | NA | other | downstream | 130429 | 12018616 ~ 12025742 (-) |
| G673053 | NA | other | downstream | 811389 | 11344473 ~ 11344782 (-) |
| G672436 | LOC107575789 | other | downstream | 1417485 | 10738224 ~ 10738686 (-) |
| G674015 | NA | other | upstream | 127442 | 12283837 ~ 12284220 (-) |
| lpgat1 | lpgat1 | other | upstream | 459485 | 12615879 ~ 12697323 (-) |
| LOC110529426 | NA | other | upstream | 1218544 | 13373030 ~ 13451428 (-) |
| G675413 | NA | other | upstream | 1327698 | 13484093 ~ 13484934 (-) |
| G675415 | NA | other | upstream | 1329284 | 13485679 ~ 13486137 (-) |
