Gene
RNA
| Item | Value |
|---|---|
| gene id | G673944 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 12230062 ~ 12231219 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| tetratricopeptide repeat protein 32 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU767676 | True | 781 | lncRNA | 0.37 | 2 | 12230062 | 12231219 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529387 | rhob | coding | downstream | 66374 | 12161773 ~ 12163688 (-) |
| LOC110529379 | hpcl1 | coding | downstream | 200753 | 12026183 ~ 12029309 (-) |
| LOC110529184 | LOC106571176 | coding | downstream | 214316 | 12013722 ~ 12015746 (-) |
| LOC110529377 | LOC106571175 | coding | downstream | 239541 | 11984834 ~ 11997491 (-) |
| LOC110529372 | NA | coding | downstream | 344213 | 11883060 ~ 11914200 (-) |
| mideasa | LOC106571189 | coding | upstream | 85387 | 12315015 ~ 12330035 (-) |
| churc1 | churc1 | coding | upstream | 114688 | 12345907 ~ 12348688 (-) |
| capn3b | can3 | coding | upstream | 143642 | 12371350 ~ 12412260 (-) |
| si:dkey-12h9.6 | LOC106571193 | coding | upstream | 208759 | 12439978 ~ 12457014 (-) |
| rd3 | LOC106571197 | coding | upstream | 310651 | 12541870 ~ 12552126 (-) |
| G673866 | NA | non-coding | downstream | 5661 | 12216835 ~ 12224401 (-) |
| G673966 | NA | non-coding | downstream | 19195 | 12210642 ~ 12210867 (-) |
| G673943 | NA | non-coding | downstream | 19814 | 12205050 ~ 12210248 (-) |
| G673942 | NA | non-coding | downstream | 73667 | 12156171 ~ 12156395 (-) |
| G673941 | NA | non-coding | downstream | 74179 | 12155596 ~ 12155883 (-) |
| G673988 | NA | non-coding | upstream | 19644 | 12250863 ~ 12251149 (-) |
| G673994 | NA | non-coding | upstream | 33246 | 12264465 ~ 12264811 (-) |
| G674000 | NA | non-coding | upstream | 42598 | 12273817 ~ 12274118 (-) |
| G674001 | NA | non-coding | upstream | 43296 | 12274515 ~ 12274784 (-) |
| G674013 | NA | non-coding | upstream | 51618 | 12282837 ~ 12283135 (-) |
| G673867 | NA | other | downstream | 88068 | 12140370 ~ 12141994 (-) |
| G673863 | NA | other | downstream | 204320 | 12018616 ~ 12025742 (-) |
| G673053 | NA | other | downstream | 885280 | 11344473 ~ 11344782 (-) |
| G672436 | LOC107575789 | other | downstream | 1491376 | 10738224 ~ 10738686 (-) |
| G674015 | NA | other | upstream | 52618 | 12283837 ~ 12284220 (-) |
| lpgat1 | lpgat1 | other | upstream | 384661 | 12615879 ~ 12697323 (-) |
| LOC110529426 | NA | other | upstream | 1143720 | 13373030 ~ 13451428 (-) |
| G675413 | NA | other | upstream | 1252874 | 13484093 ~ 13484934 (-) |
| G675415 | NA | other | upstream | 1254460 | 13485679 ~ 13486137 (-) |
