Gene
RNA
| Item | Value |
|---|---|
| gene id | G674208 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 12432447 ~ 12433143 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU767986 | False | 351 | lncRNA | 0.42 | 1 | 12432447 | 12432797 |
| TU767987 | True | 697 | lncRNA | 0.42 | 1 | 12432447 | 12433143 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| capn3b | can3 | coding | downstream | 20187 | 12371350 ~ 12412260 (-) |
| churc1 | churc1 | coding | downstream | 83759 | 12345907 ~ 12348688 (-) |
| mideasa | LOC106571189 | coding | downstream | 102412 | 12315015 ~ 12330035 (-) |
| LOC110529387 | rhob | coding | downstream | 268759 | 12161773 ~ 12163688 (-) |
| LOC110529379 | hpcl1 | coding | downstream | 403138 | 12026183 ~ 12029309 (-) |
| si:dkey-12h9.6 | LOC106571193 | coding | upstream | 6835 | 12439978 ~ 12457014 (-) |
| rd3 | LOC106571197 | coding | upstream | 108727 | 12541870 ~ 12552126 (-) |
| slc30a1a | znt1 | coding | upstream | 159539 | 12592682 ~ 12602018 (-) |
| nek2 | LOC106571199 | coding | upstream | 171553 | 12604696 ~ 12610815 (-) |
| lpgat1 | lpgat1 | coding | upstream | 182736 | 12615879 ~ 12697323 (-) |
| G674254 | NA | non-coding | downstream | 1128 | 12429554 ~ 12431319 (-) |
| G674209 | LOC106571191 | non-coding | downstream | 78647 | 12350335 ~ 12353800 (-) |
| G674204 | NA | non-coding | downstream | 107065 | 12325158 ~ 12325382 (-) |
| G674326 | NA | non-coding | upstream | 133904 | 12567047 ~ 12567554 (-) |
| G674332 | NA | non-coding | upstream | 139955 | 12573098 ~ 12573901 (-) |
| G674334 | NA | non-coding | upstream | 142733 | 12575876 ~ 12576161 (-) |
| G674336 | NA | non-coding | upstream | 144299 | 12577442 ~ 12577667 (-) |
| G674341 | NA | non-coding | upstream | 153598 | 12586741 ~ 12586951 (-) |
| G674015 | NA | other | downstream | 148227 | 12283837 ~ 12284220 (-) |
| G673867 | NA | other | downstream | 290453 | 12140370 ~ 12141994 (-) |
| G673863 | NA | other | downstream | 406705 | 12018616 ~ 12025742 (-) |
| LOC110529377 | LOC106571175 | other | downstream | 434956 | 11984834 ~ 11997491 (-) |
| G673053 | NA | other | downstream | 1087665 | 11344473 ~ 11344782 (-) |
| LOC110529426 | NA | other | upstream | 941796 | 13373030 ~ 13451428 (-) |
| G675413 | NA | other | upstream | 1050950 | 13484093 ~ 13484934 (-) |
| G675415 | NA | other | upstream | 1052536 | 13485679 ~ 13486137 (-) |
| G675834 | LOC106571238 | other | upstream | 1550483 | 13983626 ~ 13986108 (-) |
