G674877


Basic Information

Item Value
gene id G674877
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 12870556 ~ 12871735 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU768715
GAGTAGCTTTAACATGATTTATTGGGTTTAGGCATACAACTACAAAAAAAAGtgcaaaattacatttaaaagtCCTTTATAAAAACACCACATAATCTGAGAATTTTACGAATTGCTGTTGCTacataaaataggcctactgtagatTAAGTCTATTGTGGGAAGTGGTAATTTAATACCACACATTCATTCTAACAAAATAACTATGGCGTCATAAACAAACAAAAGTAAGATATTAGATGCACGTGTATATTTGTTTGGATTACCATTCTTGTGTTTCTATTTGTATAGTTGAGTAATAGTGCGCGTCAGAAGCACACCCTCTAAAACTCAACCTAGGAAACGCTGTGAACGGGTTGGGGAGGTTTCATAAATGGAAACGGACCAATAGTTGAGTAGGATTAAAATAGAACGGTATATATCAGAGATAAAACGCTGAAGTGCGTGCACTAAAATGCGCGCTATAGGTCACAACGCATGCATTCTACTGGACCGAAACAGCCACTTGTAAAGAGGAAATAGTTTACAATCTATTTATAAACAACAAGGATCGTATACATGTGTCCTGAAACACAGATGTACTGTACTTTCCAGCATGTCTTAtttgtttaaattttttttttttaaatagcataATGGTATGACCGCAAGAGCTAATGTTTGGTAAACATTTAGTTTACCAAACAAGTAGGCAATATTTTTGGTTTAGCAGATTACTTTCAAGTTAAGGCACTGGCACAAATACTATAGGATTGTTGTTGAGGGATGTGACTTTTTGTAAACCGGAATTTAGTGATTGAACACCAGTATAATTTCAAGAGACATACAATTTTGGGAAAATAAGACAAGTCACCAATTGCAGATAATGAGctactgaaacacaagcctccaACACATTACATCAAAAGTCAGTAAACTCTGTCGACAACACTAAGGTTAAGGACAGGAAACTAATAGGCTATAAATGCACTGTCCATGAAACCAAAGACTAATGAGATTTGTAGAAAATGCTAAGAGTTAAATCTATAGTCTTTATTGTAGACAGTTGTTCGATATTTTCAAATCATGAATATAAGTAGagtaaatcattttttaataACCATTTATGTAGAGATTTTCCTTTCGCCATTCAGCTCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU768715 True 1138 lncRNA 0.34 3 12870556 12871735

Neighbor

gene id symbol gene type direction distance location
ints7 ints7 coding downstream 163157 12697506 ~ 12707399 (-)
lpgat1 lpgat1 coding downstream 173233 12615879 ~ 12697323 (-)
nek2 LOC106571199 coding downstream 259741 12604696 ~ 12610815 (-)
slc30a1a znt1 coding downstream 268538 12592682 ~ 12602018 (-)
rd3 LOC106571197 coding downstream 318430 12541870 ~ 12552126 (-)
sytl3 sytl3 coding upstream 57528 12929263 ~ 12943135 (-)
enpp1 LOC100380852 coding upstream 79542 12951277 ~ 12999904 (-)
LOC110529421 NA coding upstream 287730 13159465 ~ 13164697 (-)
LOC110529423 LOC106571212 coding upstream 448720 13320455 ~ 13331260 (-)
LOC110529426 NA coding upstream 503807 13373030 ~ 13451428 (-)
G674820 NA non-coding downstream 46408 12782905 ~ 12824148 (-)
G674818 NA non-coding downstream 50527 12781640 ~ 12820029 (-)
G674747 NA non-coding downstream 78007 12792137 ~ 12792549 (-)
G674806 NA non-coding downstream 103706 12766373 ~ 12766850 (-)
G674770 NA non-coding downstream 166288 12704067 ~ 12704268 (-)
G674897 NA non-coding upstream 30756 12902491 ~ 12903493 (-)
G674842 NA non-coding upstream 56142 12927877 ~ 12928553 (-)
G674995 NA non-coding upstream 247593 13119328 ~ 13120250 (-)
G675036 NA non-coding upstream 310866 13182601 ~ 13182928 (-)
G675044 NA non-coding upstream 317245 13188980 ~ 13189359 (-)
G674015 NA other downstream 586336 12283837 ~ 12284220 (-)
G673867 NA other downstream 728562 12140370 ~ 12141994 (-)
G673863 NA other downstream 844814 12018616 ~ 12025742 (-)
LOC110529377 LOC106571175 other downstream 873065 11984834 ~ 11997491 (-)
G675413 NA other upstream 612358 13484093 ~ 13484934 (-)
G675415 NA other upstream 613944 13485679 ~ 13486137 (-)
G675834 LOC106571238 other upstream 1111891 13983626 ~ 13986108 (-)
G676077 NA other upstream 1335252 14206987 ~ 14207625 (-)

Expression


Co-expression Network