G674995



Basic Information


Item Value
gene id G674995
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 13119328 ~ 13120250 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU768839
TTAAAAGTGTCTGTGGTGATATCTGGATCACAAATATGTGATTTACTGAATTATGCTGAAGAGGTCAAACAATGAGACGTTGTTTAAAACATCATGAGATGCTACTTATATTTTTGAAGGATTTTaaaagcatttcactaaggttcATTGAAACCTTTTTTGATTGAATCACTTCAGATGGATTTGAATTAAAACATTCTTAGGGATCGGCGTCCCGTCCCATCccggacagttgtaaatcatgcagcgccttgTGTCACTATTGCAGATTTTatagaaacaacaaatgtcggtacatataagtgtcttatatcggctgaaagcttaaattcttgttaatataactgcactgtccaatttacagtagctcttactgcaaaaaaaatgccatgttattgtttgaggagagctcctaacaacaaaacactttttcacTGCGATAgttttgataaattcacctctgaaggtgaaatgtgtacttacattctgaaatcttgctctgatttatTTGGTCAGACAGCGAAACCTTCATGACACGCTGAAGAAGTGGGCGGTCTTCACTTGAACGACTAAATTTgccaaataagcaccaatcggggtcaaacaaatccagctagatagccaatgagctgggctttatgggagtatCCAGAAACCATGTATCTGTTGGAAAATGTAGCTATTAACCTTGT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU768839 True 692 lncRNA 0.37 2 13119328 13120250

Neighbor


gene id symbol gene type direction distance location
enpp1 LOC100380852 coding downstream 119424 12951277 ~ 12999904 (-)
sytl3 sytl3 coding downstream 176193 12929263 ~ 12943135 (-)
ints7 ints7 coding downstream 411929 12697506 ~ 12707399 (-)
lpgat1 lpgat1 coding downstream 422005 12615879 ~ 12697323 (-)
nek2 LOC106571199 coding downstream 508513 12604696 ~ 12610815 (-)
LOC110529421 NA coding upstream 39215 13159465 ~ 13164697 (-)
LOC110529423 LOC106571212 coding upstream 200205 13320455 ~ 13331260 (-)
LOC110529426 NA coding upstream 255292 13373030 ~ 13451428 (-)
tmem151ba tmem151b coding upstream 377768 13496434 ~ 13509334 (-)
hsp90ab1 hsp90ab1 coding upstream 431998 13552248 ~ 13558751 (-)
G674842 NA non-coding downstream 190775 12927877 ~ 12928553 (-)
G674897 NA non-coding downstream 215835 12902491 ~ 12903493 (-)
G674877 NA non-coding downstream 247593 12870556 ~ 12871735 (-)
G674820 NA non-coding downstream 295180 12782905 ~ 12824148 (-)
G674818 NA non-coding downstream 299299 12781640 ~ 12820029 (-)
G675036 NA non-coding upstream 62351 13182601 ~ 13182928 (-)
G675044 NA non-coding upstream 68730 13188980 ~ 13189359 (-)
G675046 NA non-coding upstream 70528 13190778 ~ 13191002 (-)
G675053 NA non-coding upstream 79386 13199636 ~ 13199905 (-)
G675049 hlx non-coding upstream 83475 13203725 ~ 13205348 (-)
G674015 NA other downstream 835108 12283837 ~ 12284220 (-)
G673867 NA other downstream 977334 12140370 ~ 12141994 (-)
G673863 NA other downstream 1093586 12018616 ~ 12025742 (-)
LOC110529377 LOC106571175 other downstream 1121837 11984834 ~ 11997491 (-)
G675413 NA other upstream 363843 13484093 ~ 13484934 (-)
G675415 NA other upstream 365429 13485679 ~ 13486137 (-)
G675834 LOC106571238 other upstream 863376 13983626 ~ 13986108 (-)
G676077 NA other upstream 1086737 14206987 ~ 14207625 (-)

Expression



Co-expression Network