Gene
RNA
| Item | Value |
|---|---|
| gene id | G675049 |
| gene name | hlx |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 13203725 ~ 13205348 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| hlx | Enables sequence-specific DNA binding activity. Predicted to be involved in cell differentiation and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within several processes, including animal organ development; enteric nervous system development; and regulation of T-helper cell differentiation. Predicted to be located in nucleus. Predicted to be part of chromatin. |
| description |
|---|
| H2.0-like homeobox protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU768896 | True | 718 | lncRNA | 0.48 | 2 | 13203725 | 13205348 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529421 | NA | coding | downstream | 39028 | 13159465 ~ 13164697 (-) |
| enpp1 | LOC100380852 | coding | downstream | 203821 | 12951277 ~ 12999904 (-) |
| sytl3 | sytl3 | coding | downstream | 260590 | 12929263 ~ 12943135 (-) |
| ints7 | ints7 | coding | downstream | 496326 | 12697506 ~ 12707399 (-) |
| lpgat1 | lpgat1 | coding | downstream | 506402 | 12615879 ~ 12697323 (-) |
| LOC110529423 | LOC106571212 | coding | upstream | 115107 | 13320455 ~ 13331260 (-) |
| LOC110529426 | NA | coding | upstream | 170194 | 13373030 ~ 13451428 (-) |
| tmem151ba | tmem151b | coding | upstream | 292670 | 13496434 ~ 13509334 (-) |
| hsp90ab1 | hsp90ab1 | coding | upstream | 346900 | 13552248 ~ 13558751 (-) |
| LOC110529434 | LOC106571223 | coding | upstream | 393028 | 13598376 ~ 13601561 (-) |
| G675053 | NA | non-coding | downstream | 3820 | 13199636 ~ 13199905 (-) |
| G675046 | NA | non-coding | downstream | 12723 | 13190778 ~ 13191002 (-) |
| G675044 | NA | non-coding | downstream | 14366 | 13188980 ~ 13189359 (-) |
| G675036 | NA | non-coding | downstream | 20797 | 13182601 ~ 13182928 (-) |
| G674995 | NA | non-coding | downstream | 83475 | 13119328 ~ 13120250 (-) |
| G675077 | NA | non-coding | upstream | 33920 | 13239268 ~ 13239551 (-) |
| G675110 | NA | non-coding | upstream | 56506 | 13261854 ~ 13262082 (-) |
| G675111 | NA | non-coding | upstream | 57098 | 13262446 ~ 13262657 (-) |
| G675151 | NA | non-coding | upstream | 70917 | 13276265 ~ 13276472 (-) |
| G675154 | NA | non-coding | upstream | 86888 | 13292236 ~ 13294834 (-) |
| G674015 | NA | other | downstream | 919505 | 12283837 ~ 12284220 (-) |
| G673867 | NA | other | downstream | 1061731 | 12140370 ~ 12141994 (-) |
| G673863 | NA | other | downstream | 1177983 | 12018616 ~ 12025742 (-) |
| LOC110529377 | LOC106571175 | other | downstream | 1206234 | 11984834 ~ 11997491 (-) |
| G675413 | NA | other | upstream | 278745 | 13484093 ~ 13484934 (-) |
| G675415 | NA | other | upstream | 280331 | 13485679 ~ 13486137 (-) |
| G675834 | LOC106571238 | other | upstream | 778278 | 13983626 ~ 13986108 (-) |
| G676077 | NA | other | upstream | 1001639 | 14206987 ~ 14207625 (-) |
