G675157



Basic Information


Item Value
gene id G675157
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 13299892 ~ 13300705 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU769027
TTGTTAGGACAGGATAGGGCAGACCAGGGAAGGGCAGTGCAGGACGAAGAGAGAGAAAATGCGAGGGGCAATAAAAGTGTCATTTTTCACCTCGGTTCTAAACACAtcataacgttctaaacacgtcataacgttctaaacactttgtagtgctctaaacacgtcataacgttctaaagacgtcataacgttctaaacactttgtagtgttctaaacacgtcatagtgttctaaacacgtcaaagtgttctaaacacgtcatagtgttctaaacacgtcttaacgttctaaacacgtcataacgttctaaacacgtcatagtgttctaaacacatcataacgttctaaacacgtcataacgttctaaacacgtcgtaatgttctaaacacgtcataacgttctaaacactttgtagtgctctaaacacgtcataacgttctaaagacgtcataacgttctaaacactttgtagtgttctaaacacgtcatagtgttctaaacacgtcaaagtgttctaaacacgtcatagtgttctaaacacgtcataacgttctaaacacgtcataacgttctaaacacgtcatagtgttctaaacacgtcataacgttctaaacacgtcatagtgttctaaacacgtcataacgttctatacacgtcatagtgttctaaacacgtcattgtgttctaaacacgtcatagtgttctaaacacgtcatagtgttccaAACACGtcagtgttctaaacacgtcctaacgttctaaacacgtcgtagtgctctgaacacgtcatagtgttctaaacacgtcataac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU769027 True 814 lncRNA 0.39 1 13299892 13300705

Neighbor


gene id symbol gene type direction distance location
LOC110529421 NA coding downstream 135195 13159465 ~ 13164697 (-)
enpp1 LOC100380852 coding downstream 299988 12951277 ~ 12999904 (-)
sytl3 sytl3 coding downstream 356757 12929263 ~ 12943135 (-)
ints7 ints7 coding downstream 592493 12697506 ~ 12707399 (-)
lpgat1 lpgat1 coding downstream 602569 12615879 ~ 12697323 (-)
LOC110529423 LOC106571212 coding upstream 19750 13320455 ~ 13331260 (-)
LOC110529426 NA coding upstream 74837 13373030 ~ 13451428 (-)
tmem151ba tmem151b coding upstream 197313 13496434 ~ 13509334 (-)
hsp90ab1 hsp90ab1 coding upstream 251543 13552248 ~ 13558751 (-)
LOC110529434 LOC106571223 coding upstream 297671 13598376 ~ 13601561 (-)
G675154 NA non-coding downstream 5058 13292236 ~ 13294834 (-)
G675151 NA non-coding downstream 23420 13276265 ~ 13276472 (-)
G675111 NA non-coding downstream 37235 13262446 ~ 13262657 (-)
G675110 NA non-coding downstream 37810 13261854 ~ 13262082 (-)
G675077 NA non-coding downstream 60341 13239268 ~ 13239551 (-)
G675174 NA non-coding upstream 31983 13332688 ~ 13332904 (-)
G675351 NA non-coding upstream 57915 13358620 ~ 13359153 (-)
G675353 NA non-coding upstream 70163 13370868 ~ 13371324 (-)
G675360 NA non-coding upstream 101734 13402439 ~ 13403248 (-)
G674015 NA other downstream 1015672 12283837 ~ 12284220 (-)
G673867 NA other downstream 1157898 12140370 ~ 12141994 (-)
G673863 NA other downstream 1274150 12018616 ~ 12025742 (-)
LOC110529377 LOC106571175 other downstream 1302401 11984834 ~ 11997491 (-)
G675413 NA other upstream 183388 13484093 ~ 13484934 (-)
G675415 NA other upstream 184974 13485679 ~ 13486137 (-)
G675834 LOC106571238 other upstream 682921 13983626 ~ 13986108 (-)
G676077 NA other upstream 906282 14206987 ~ 14207625 (-)

Expression



Co-expression Network