G675337


Basic Information

Item Value
gene id G675337
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 13409748 ~ 13415280 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU769245
TCTTTAATCATGTACAAAAAAAATGGTTGTTTTTAAATTTAAAAGAAATCTAAAGTATCCCTGAAATGTAACAAATTACAAATGTGAAAGGTAATGAAGGTGTTGGATCTACATGGCTTTACACATGATATATCTATCCATACAAAACATACATTGAAGGGAAATGTTTAACAGTGCTCAAACTATAATGGGTTTCATTCAAGAGTCTTCATGTTTCATAACTGCAGTCGATTTGACCAGCTTTATTCATAAAATATCCTAAGAACATAAGTTATACATCTGACCTTCAATTGACCCTTCACTAACCCCCCTTGGTTACTGTTGCAACCTCAGGGATGCTCAATTCCAACATTCATTGAGATAACCATTTAATAAGttatcactagttaccacagccaaagtcataattatggctaaaccTCATTATTTCTTAAAATCCCAACACTAACCTAACAATTGCTGGTCAATGAGACAGCGCTAGCTAACCAGCTGAGCTAGCAAACAAGGTAAAAAATGTATAATTAGAGAGAATTTCAGGAATCACAGTAGCAAGTACTCCTGGTGCCCTGTGCAAATATTTAGCTTAAGAAAAGTTTTTGCAATAGCCCTCACTGGCTTTTATGCGATTTAAAACGTGCCGCGAGCTTGTCCGAGGTGGAGCGCGGCAATTAGTTGCCCAAAATGGGGGCGGGTTTAGCGAAAGGTCAATTTTATAAGCGACAGCTTTAGGGAGAGTGGTAAGATAATACTTCTGAAATGATCGATCAAGCAACAAAGACTTGTTAAGCCCGCCCCTTTATTTTAAATAATTTCCACAGGAAACCATAACATTGTGAAATTAATACAAAATCAATGTAATACCCTTTTGTTTTACCTTACAAAATAAAAACGTAATTTTCAGGCATACAATAGAAATGTTATTGCACAATAAGCCTTCTTGCATGGTGGCAGACAGTCATTTACATTTCAGACACGGAACATAAGACAAATTTTCTGATGCTTTAGTAGGAAAACTAGCTTTTTAGATGCTTCCGTTTGcaaatatatacactatatattacacacacaaaagtatgtggacacccctttaaaattagtggattcggccatttcagtcacacccgttgctgacaggtgtatacaatcgagcacacagccatgcaatctccatagccaaacattggcagtagaatggccttactggagagctcagtgactcaatgtggcaccgtcataggatataaactcagcaaaaaaagaaaacgtcCATTTTTcatgaccctgtctttcaaaaataatttgtaaaaatccaaataacttcacagatcttcaatgtaaagggtttaaacactgtttcccatgcttgttcaatgaaccataaacaattaatgaacgtgcacctgtgaaacggtcgtaaaagacactaacagcttacagacggtaggcaattaaggtcacagttatgaaaactgaggacactgaagaggcctttctgctgactctgaaaacaccaaaagaaagatgcccagggtccctgctcatctgtgtggatgtgccttaggcatgctgcaaggaggcatgaggactgcagatgtgaccagggcaataaattgcaatgtccgtactgtgagaggcctaagacagtgctacagggagacaggacggacagctgatcgtcctcacagtggcagaccacgtgtaacacctgcacaggatcggtacatcacagatgcgggacaggtacaggatggcaacaactgcccgagttgcacaatccctccatcagtgatcagactgtccgcaataggctggactgagggcttgtaggcctgttgtaaggcaggtcctcaccggcAACGCCaccgcctatgggcacaaacccaccgtcgctggaccagacaggactggcaaaaaagtgctcttcactgacgagacgTGGTTCTGTTtctccaggggtgatggtcggattcgtatttatcgttgaaggaatgagagttacactgaggcctttattctggagcaggatcgatttggaggtggagggtccgtcatggtctggggtggtgtgccACAGCaacattggactgagcttgttgtcattgcaggcgtTCTCAAcgatgtgcgttacagggaagacatcctcctccctcatgtggtacccttcctgcaggctcatcctgacatgaccctctagcatgataatgccaccagccatactgctcgtcctgtgcgtgatttcctgtaagacaggaatgtcagtgttctgccatggccagcgaagacctgttggatcagagggtgagggccattcccccccagaaatgtccaggaacttgcaggtgccttagtggaagagtggggtaacatctcacagcaagaactggcaaatctggtgcagtccatgaggaggagatgcactgaagtacctaatgcagctggtggccacaccagatactgacttacttttgattttgaccccccctttgttcagggacacattattcaatttgttagtcacatgtctgtagaacgtgttcagtttatgtcttatattcttatattcatacaaatatttacacgttacgtTTGccgaaaataaatgcagttgacagtgaggacatttctttttctgctgagtttgatgccacctttccaacaaatcaaaTGCCTGCCCtggtattttgtggcaaaagtttgggaaaggccctttcctgtttcagcatgacaatgcccccatgcacaaagcaaagtccatacagacatggtttgtcaagatcagtgtggaagaacttgactggccggcacagagccctgacctcagccccttcgaacaccttcgggatgaattggactgccgactgcaagccaggcctaatcgcccaacatcagtgcccgacctcactaatgctcgtggctgaatggaagcaagtccccaaagcaatgttccaacatctagtggaaagccttcccagaagagtggaggctgttatagcaaagggggagaccaactccatactaATGCCAATGATTTAGAAATTAAATGtttgtttgatgagcaggtgtccccacatacttttggtcatgtagtaatGGGATATATGAAATAACTTGGTACACTAatagtcaaaagtgtggacacacctactcattccagggaattatatttttactttgtagaacagtgaagacatcaaaactgtgaaataacatatggaatcatgtatattttatatttgagattcttcaaagtagccacccgttgccttgacagatttgcacattcttggcattctctcaaccagcttcatgtggtagttacctggaatgcctttcaataaacaggtgtgcctcgttaagttaatttgtggcatttccttcttaatgcgtttgagccaatcagttgtgttgtgacaaggtagaggtgatacagaagataaccctatttggtaaaagaccaagtccatattatggcaaaaacagctcaaataagcaaagagaaatgacagtccatcattactttaagacatgaaggtcagtcaatgcggaacatttcaagaactttgaaagtttcttcaagtgcagtcacaaaaaccctCAAgctctgtgatgaaactggctctcatgaagactgTCACAagggagacccagagttacctctgctgcagaggatacgttcattagaattaccagcctcagaaattgcagcccaaataaatgcttcagagttcaagtaacagacacaacaacaactgttcagaggagacagcgtgaattaggccttcatggttgaattgctgcaaagaaaccactactaaaggacaccaataagagacttgtttgggccaaggaATAcatgcaatggacattagaccagaggaactctgtcatttggtctgatgagtccaaatttttgaTTCCAACCACTGTCTTTGAGAAACAGAGTAAGTGAATGGATGATCACTGCATGCGTGGTttcaactgtgaagcatggaggtggtggtgtggggttgctttgctggttacactgtctgatttatttagaattcaaggcacacttaaccagcatggctaccacagcattctgcagcgatataccattgcatctggtttgggcttagtgggactaacatttgtttttcaacaggacaatgacccaacacacctccaggctgtgtaagggctagttgaccaagaaggaaagggatggagtgctgcagatgacctggcctccacaatcacctgacctcaacccaattgggatGGTTTTGgattagttggaccgcagagtgaaggaaaagcagccaacaagtgctcagcatatatgggaactccttcaaaactgttggaaaagcattcctcatgaagttggttgggagaatgccaagagtgtgcaaagctgtcatcaaggcaaagggtgtctactttgaataatctaaaatatattttgatttgtttaacactttattggttactacttgattccctatgtgatatttcattgttttggtttatttactattgttctacaatgtagaaaatagtaaaaataaagaaacccttgaatgagtaggtgttcaaacttttgactggcactaatatatatatatccaaattAAATCTAAAGGAAAGGGGAAAAATAAAGATAAATCGTGGTTGATTAGACATAGCCGGGTTGTTAATGGTAGCAGGTGGTATCCAAGCCCTCTGACATAGTTGGTGGGTGTCTAAGGCTCTCCCATGGAGGAGCTGACTGAGTCCTGGGGGGTAGCTGCTGCCTGCTGGGAGCTGTAGTCTTGCCCCTGGGGACCCACAGAAGAGTCATGCCCATGGGGGGCCTGCTGCATGGGGGGCTGCCCGGGGAAGTCTCTGGGGCCACTGTGAGGAGGGTATGGGGCCGCTCCTGGGGGCAGGTGCTGGGGTGGGATGGAGTGATCACGTGGTCCGTAGTGCATGTAGGGACGTGGTGGTCCCATGGGTCGGGCCATAGGGGGGCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU769245 True 4994 lncRNA 0.44 2 13409748 13415280

Neighbor

gene id symbol gene type direction distance location
LOC110529426 NA coding downstream 25293 13373030 ~ 13451428 (-)
LOC110529423 LOC106571212 coding downstream 78488 13320455 ~ 13331260 (-)
LOC110529421 NA coding downstream 245051 13159465 ~ 13164697 (-)
enpp1 LOC100380852 coding downstream 409844 12951277 ~ 12999904 (-)
sytl3 sytl3 coding downstream 466613 12929263 ~ 12943135 (-)
tmem151ba tmem151b coding upstream 82738 13496434 ~ 13509334 (-)
hsp90ab1 hsp90ab1 coding upstream 136968 13552248 ~ 13558751 (-)
LOC110529434 LOC106571223 coding upstream 183096 13598376 ~ 13601561 (-)
LOC110529435 LOC106571224 coding upstream 211481 13626761 ~ 13632856 (-)
LOC110529441 LOC106571256 coding upstream 925220 14340500 ~ 14392658 (-)
G675360 NA non-coding downstream 6500 13402439 ~ 13403248 (-)
G675353 NA non-coding downstream 38424 13370868 ~ 13371324 (-)
G675351 NA non-coding downstream 50595 13358620 ~ 13359153 (-)
G675174 NA non-coding downstream 76844 13332688 ~ 13332904 (-)
G675157 NA non-coding downstream 109043 13299892 ~ 13300705 (-)
G675385 NA non-coding upstream 7801 13423081 ~ 13423661 (-)
G675414 NA non-coding upstream 69769 13485049 ~ 13485449 (-)
G675416 NA non-coding upstream 70979 13486259 ~ 13486787 (-)
G675417 NA non-coding upstream 72646 13487926 ~ 13489379 (-)
lpgat1 lpgat1 other downstream 712425 12615879 ~ 12697323 (-)
G674015 NA other downstream 1125528 12283837 ~ 12284220 (-)
G673867 NA other downstream 1267754 12140370 ~ 12141994 (-)
G673863 NA other downstream 1384006 12018616 ~ 12025742 (-)
G675413 NA other upstream 68813 13484093 ~ 13484934 (-)
G675415 NA other upstream 70399 13485679 ~ 13486137 (-)
G675834 LOC106571238 other upstream 568346 13983626 ~ 13986108 (-)
G676077 NA other upstream 791707 14206987 ~ 14207625 (-)
G676178 NA other upstream 872569 14287849 ~ 14288345 (-)

Expression


Co-expression Network