G675413


Basic Information

Item Value
gene id G675413
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 13484093 ~ 13484934 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU769335
caggacaataggcaagcagcttggtgagaaggcaacaactgttggcgcaattatttgaaaatggaagaagttcatgATGAttgtcaatcaccctcggtctggggctccatgcaagatctcacctcgtggggcatcaatgatcatgaggaaggtgaaggatcagcccagaactacacggcaggacctggtcaatgacctgaagagagctgggaccacagtctcaaagaaaaccattagtaacacactacgccgtcatggattaaaatcctgcaacacacgcaaggtccccctgctcaagccagcgcatgtccaggcccatctgaagtttgccaatgaccatctggatgatccaggggaggaatgggagaaggtcatgtggtctgatgagacaaaaatatagctttttggtctaaactccactcgccgtgtttggtggaagaaggatgagtacaaccccaacaacaccatcccaaccgtgaagcatggaggtggaaacatcatgctttgtggatgcttttctgcaaaggggataggacgactgcaccgtattgaggggaggatggatggggccttgtatcgcaagatcttagccaacaacctccttccctcagtaagagcattgaagatgggtcgtggctggctcttccagcatgacaacgacccgaaacacacagccagggaaactaaggagtggctccgtaagaagcatctcaaggtcctggagtggcctagccagtctccagacctgaacccaatagaaagtCTTGAGGGAGCTGAATgcccgtattgcccagcaacagccccgaaacttgaaggatctggagaaggtctgtatggaggag

Function

NR:

description
Transposable element Tcb1 transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU769335 True 842 TUCP 0.51 1 13484093 13484934

Neighbor

gene id symbol gene type direction distance location
LOC110529426 NA coding downstream 99638 13373030 ~ 13451428 (-)
LOC110529423 LOC106571212 coding downstream 152833 13320455 ~ 13331260 (-)
LOC110529421 NA coding downstream 319396 13159465 ~ 13164697 (-)
enpp1 LOC100380852 coding downstream 484189 12951277 ~ 12999904 (-)
sytl3 sytl3 coding downstream 540958 12929263 ~ 12943135 (-)
tmem151ba tmem151b coding upstream 13084 13496434 ~ 13509334 (-)
hsp90ab1 hsp90ab1 coding upstream 67314 13552248 ~ 13558751 (-)
LOC110529434 LOC106571223 coding upstream 113442 13598376 ~ 13601561 (-)
LOC110529435 LOC106571224 coding upstream 141827 13626761 ~ 13632856 (-)
LOC110529441 LOC106571256 coding upstream 855566 14340500 ~ 14392658 (-)
G675385 NA non-coding downstream 60432 13423081 ~ 13423661 (-)
G675337 NA non-coding downstream 68813 13409748 ~ 13415280 (-)
G675360 NA non-coding downstream 80845 13402439 ~ 13403248 (-)
G675353 NA non-coding downstream 112769 13370868 ~ 13371324 (-)
G675414 NA non-coding upstream 115 13485049 ~ 13485449 (-)
G675416 NA non-coding upstream 1325 13486259 ~ 13486787 (-)
G675417 NA non-coding upstream 2992 13487926 ~ 13489379 (-)
G675422 NA non-coding upstream 26011 13510945 ~ 13511768 (-)
lpgat1 lpgat1 other downstream 786770 12615879 ~ 12697323 (-)
G674015 NA other downstream 1199873 12283837 ~ 12284220 (-)
G673867 NA other downstream 1342099 12140370 ~ 12141994 (-)
G673863 NA other downstream 1458351 12018616 ~ 12025742 (-)
G675415 NA other upstream 745 13485679 ~ 13486137 (-)
G675834 LOC106571238 other upstream 498692 13983626 ~ 13986108 (-)
G676077 NA other upstream 722053 14206987 ~ 14207625 (-)
G676178 NA other upstream 802915 14287849 ~ 14288345 (-)
G676635 LOC106571254 other upstream 1026656 14508329 ~ 14516528 (-)

Expression

G675413 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 2.
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G675413 Expression in each Bioproject

Bar chart with 21 bars.
G675413 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 60.
End of interactive chart.

Co-expression Network