G675416



Basic Information


Item Value
gene id G675416
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 13486259 ~ 13486787 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU769338
tttttaatgaatttatttgcaaattatggtggaaaataagtatttggtcacctacaaacaagcaagatttctggctctcacagacctgtaacttcttctttaagaggcccctctgtcctcgactcgttacctgtattaatggcacctgtttgaacttgttatcagtataaaagacacctgtccacaacctcaaacagtcacactccaaaccccactatggccaagaccaaagagctgtcaaaggacaccagaaacaaaattgtagacctgcaccaggctgggaagactgaatctgcaataggtaagcagcttggtttgaagaaatcaactgtgggagcaattgttaggaaatggaagacatacaagacctgataatctccctcgatctggggcttcacgcaagatctcaccccgtggggtcaaaatgatcacaagaacggtgagcaaaaatcccagaaccacacggggggacctagtgaatgacctgcagagagctgggaccaaagtaacaaagcctaccatcagtaac

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU769338 True 529 lncRNA 0.44 1 13486259 13486787

Neighbor


gene id symbol gene type direction distance location
LOC110529426 NA coding downstream 101804 13373030 ~ 13451428 (-)
LOC110529423 LOC106571212 coding downstream 154999 13320455 ~ 13331260 (-)
LOC110529421 NA coding downstream 321562 13159465 ~ 13164697 (-)
enpp1 LOC100380852 coding downstream 486355 12951277 ~ 12999904 (-)
sytl3 sytl3 coding downstream 543124 12929263 ~ 12943135 (-)
tmem151ba tmem151b coding upstream 11231 13496434 ~ 13509334 (-)
hsp90ab1 hsp90ab1 coding upstream 65461 13552248 ~ 13558751 (-)
LOC110529434 LOC106571223 coding upstream 111589 13598376 ~ 13601561 (-)
LOC110529435 LOC106571224 coding upstream 139974 13626761 ~ 13632856 (-)
LOC110529441 LOC106571256 coding upstream 853713 14340500 ~ 14392658 (-)
G675414 NA non-coding downstream 810 13485049 ~ 13485449 (-)
G675385 NA non-coding downstream 62598 13423081 ~ 13423661 (-)
G675337 NA non-coding downstream 70979 13409748 ~ 13415280 (-)
G675360 NA non-coding downstream 83011 13402439 ~ 13403248 (-)
G675417 NA non-coding upstream 1139 13487926 ~ 13489379 (-)
G675422 NA non-coding upstream 24158 13510945 ~ 13511768 (-)
G675369 nfkbie non-coding upstream 29852 13516639 ~ 13517394 (-)
G675377 NA non-coding upstream 31870 13518657 ~ 13519773 (-)
G675415 NA other downstream 122 13485679 ~ 13486137 (-)
G675413 NA other downstream 1325 13484093 ~ 13484934 (-)
lpgat1 lpgat1 other downstream 788936 12615879 ~ 12697323 (-)
G674015 NA other downstream 1202039 12283837 ~ 12284220 (-)
G675834 LOC106571238 other upstream 496839 13983626 ~ 13986108 (-)
G676077 NA other upstream 720200 14206987 ~ 14207625 (-)
G676178 NA other upstream 801062 14287849 ~ 14288345 (-)
G676635 LOC106571254 other upstream 1024803 14508329 ~ 14516528 (-)
G679087 NA other upstream 2945834 16432621 ~ 16433014 (-)

Expression



Co-expression Network