G675377



Basic Information


Item Value
gene id G675377
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 13518657 ~ 13519773 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU769295
TTTCCTTTAAACGTGTCAAAGTAAGCAGCCTCAGGAGATGAGAACAACATATCATTTGATGGAAAGAATTACCTGCTTGAGCATTCTTAGAATGATATCCAGACCTACCTGGAAATGTAAGACATTGCATTAATGTCAACTGTTTGCTTAGCAGGCCACACTCATTGGTTGCGAATGTTGTGCAATAATGGAACTTTTATGCAAAGAACAGTCATGTCAGGAGGATGTTTCATTCCGCAAAGCACTTTTCAAATATGTATCTTCTTGGGTATCATTCACCACTAGAACCGTAGTTACTTGAAGAAGAACAAACAAAACTATCGGTTGATGAAGGGATGTTTAACATACACAAACCGCAGACCTATGAACTTTAACTACACAGTTAAAATGCAAATGCAATGAATTTTGTTCTTTACTGCACCCCATTCACGCTGTCATCACATTTGGTTCATACAGTCAAAGTGGAAAACAACCACACCAAGAAACACTCACCCCAAAAGCTAAAGGGGAAGTTCTAGCAGACAAGAGTCAAATGCAGGAAATGGGCACAACAGTGCTTTGTTTAACCTACATCAAGGCTTTCCAAAACACATTGTTCACACAttattccctacaaagtgcattactttggaccagagctACATTTTCAACCTAACTAACTGATGTGAAAGTAGTGTAGAAGGCCGATAAGGCCAAAAgtctgcatgtctgtgtgtctgtggtaatTGTATGAGTTTCATTAATCAGTCTATTCTTGGGAGATAATTACTATGTGAACATGTGCCCTGCCTCGTCTATCATGGGGAATTTCCAGTGCTGTGTCTTTTACACTTCTGCTTTCCAAGTCGAGGCACCTCACAGGAGTTCATCCGCAGCTTTCACACAAAGGCCTGAGAGTATGTATCACTCCACACTTAAAACTCTCCTCTTAGTCGACATCACATGCCATGATTATTGGAATTAGGATAAATATGACACGCAAAGAAAGAGCTGTGCAGGGCAAAACTACAGGTCATTCCCCAAGCCTTGATTTATTCATCCAGACAGCAACAACAATTGGTGGTTGTTTTGATTGTTCGCTGCAAATTGGTGCAGTAGGCCTAATCTACGAAAACGC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU769295 True 1117 lncRNA 0.41 1 13518657 13519773

Neighbor


gene id symbol gene type direction distance location
tmem151ba tmem151b coding downstream 9323 13496434 ~ 13509334 (-)
LOC110529426 NA coding downstream 134202 13373030 ~ 13451428 (-)
LOC110529423 LOC106571212 coding downstream 187397 13320455 ~ 13331260 (-)
LOC110529421 NA coding downstream 353960 13159465 ~ 13164697 (-)
enpp1 LOC100380852 coding downstream 518753 12951277 ~ 12999904 (-)
hsp90ab1 hsp90ab1 coding upstream 32475 13552248 ~ 13558751 (-)
LOC110529434 LOC106571223 coding upstream 78603 13598376 ~ 13601561 (-)
LOC110529435 LOC106571224 coding upstream 106988 13626761 ~ 13632856 (-)
LOC110529441 LOC106571256 coding upstream 820727 14340500 ~ 14392658 (-)
LOC110529444 LOC106571255 coding upstream 876238 14396011 ~ 14471129 (-)
G675369 nfkbie non-coding downstream 1263 13516639 ~ 13517394 (-)
G675422 NA non-coding downstream 6889 13510945 ~ 13511768 (-)
G675417 NA non-coding downstream 29278 13487926 ~ 13489379 (-)
G675416 NA non-coding downstream 31870 13486259 ~ 13486787 (-)
G675371 nfkbie non-coding upstream 4755 13524528 ~ 13526589 (-)
G675426 NA non-coding upstream 9765 13529538 ~ 13530033 (-)
G675427 NA non-coding upstream 11312 13531085 ~ 13531462 (-)
G675428 NA non-coding upstream 11777 13531550 ~ 13531926 (-)
G675430 NA non-coding upstream 14693 13534466 ~ 13534800 (-)
G675415 NA other downstream 32520 13485679 ~ 13486137 (-)
G675413 NA other downstream 33723 13484093 ~ 13484934 (-)
lpgat1 lpgat1 other downstream 821334 12615879 ~ 12697323 (-)
G674015 NA other downstream 1234437 12283837 ~ 12284220 (-)
G675834 LOC106571238 other upstream 463853 13983626 ~ 13986108 (-)
G676077 NA other upstream 687214 14206987 ~ 14207625 (-)
G676178 NA other upstream 768076 14287849 ~ 14288345 (-)
G676635 LOC106571254 other upstream 991817 14508329 ~ 14516528 (-)
G679087 NA other upstream 2912848 16432621 ~ 16433014 (-)

Expression



Co-expression Network