G675371 (nfkbie)


Basic Information

Item Value
gene id G675371
gene name nfkbie
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 13524528 ~ 13526589 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU769289
GTTGATTATATTCTGTTTATTACAAAATATAAGAGTTTGAAACTGTTAAGAGAAGGCTCAAAGATCAAAGCTAATTAATCAGAGAGAAGGAGGATGGTTAAACAGGGAAAATTTAACTGTATTGAAAATACATCTATTACGATAAAATGTGTCTTACCAACAAAGATACTGGCAAGGCAATGCATTCAAAGTATAAACCAATAAATGAAATATACAATGAAAGATATTAAGTTATGATAATAGATAAAGAACCTCTTTATGATAACAGATTTACAGTgactaaagttttttttaaatgtaaagttCCATTCTGAGAGCTGAAACTATTTTAACTTACAGCATGACAGCAATGCATTTTCTTAATCAGTTAGTATACACATTTGATAGAGGTAGATTCCTTGTATTTTACAGGGAAATTAAACTTTTGAATTCTTCCCACTCATAATCATCTGTTTTTCATAGTAAATGAATGTAGTTCATTTAGTTTCCAAGTGAGATTTAACTGCTCCTAGTATTTGATTACAGGTATAGAACTAATTCAGTAGATATACATTTTCCCCTTTGTACCTTTCGCTAGTGGAGAAAAAGCTACTTTTCAATGTGAATTTCTCATGCAGAGGGACAAATCCTAACTTTGACTTTTCATGCACAACTCAATCTTTCATTGACTTCAATGCATGATTAACACAAAAGGCATGCAGATTGCAGGTTAGTATTCAGCCCATATAGTATATAGTCAtgatgtacaaaacattaggagcaccttccTAACATTGCGTTGCACCCCCCCGCCCCTCCCCTTTGAACTAAAAACTGCTttaattcatcggggcatggactctacaaggcgtccaaagcgttccacagggatgctgacgcatgttgactccaatgcttcccacaaatgtgtcaaattgactggatgtcctttgggtggtgggccattttttgatacacacaggaaactgttgagcgtgaaaaacccagcagagtatgcagttcttgacaccctccaactggtgcacctggcccctactaccataccccattcaaagtctcttgcccattcaccttctgaatggcacacatacacaatccatgtctcttgggtctcaagacttaaaaatccttctttaaccggtctcctccccttcatctacactgattgaagtagatttaacaataagggatcatagcttccacctggattcacctggtcagtctatatcagcaggtgttcctaatgttttgttcactcagtgtacaCACAATATAAATGAAAGTAAACCATCACACAATAAGAAACATGATTGAAGTAAAGCTACAGTTTTCCGATGAGGCTCCATGATGAGGCTCAAGATGTTCAAGATTCAAAATGTCTCCAGCTGTAGAGTATATTCAGGTGGTGAGAGTACACTCAGAATGGCCCTCCAACCACTGACCTGCCCTGGATTTGAATGTCATCAAAAGGGAAAAGAGCAAGGATCTGAAAGGAAGCCATATGGTGGGGGTTTATTTTTCACATATTTTATACCTCTGAtccagacaacagtccagtcaGTCTCTTTCATAACAATTAATAAATTGGGAATGTTACAATTTCCCCCCAAATCctcaaaaatatgtatttatagCATTTTCAGTGAATATCAGCGGACTTCGAGTCAAACGCCAAATACACTTTGAGTtgatttcccagacacagatgaagttTATAGCtatagtcctggactaaaaaaagCATTTTCAATGGAGAATCTTTTTAGTCCAGTACAAGGATTCATTTGTGTGTGGGAAACTGACCCTTCCTGTATAACTCACATCATCATTGCCGTCGGCTAGATCCAGTGCCGTCTCATCCTCCATGTTCCTCAGCATCTTGTCGGCCCCAGACTGGCAGAGCAGGTTGGCGATGGCTGCGTCCTGCCGGCCCACCGCCAGGTGAAGTGGCGTGCAGCCGTTAAACATTGCAGCGTCCATGTCAGCTCCCTTGTTCAGCAGCAGAGTCACAGAGATTGCGTCATGGAGCTCCACGGCCAGATGGAGAGCTGTCTTACCACTT

Function

symbol description
nfkbie Orthologous to human NFKBIE (NFKB inhibitor epsilon).

NR:

description
NF-kappa-B inhibitor epsilon

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU769289 True 2062 lncRNA 0.40 1 13524528 13526589

Neighbor

gene id symbol gene type direction distance location
tmem151ba tmem151b coding downstream 15194 13496434 ~ 13509334 (-)
LOC110529426 NA coding downstream 140073 13373030 ~ 13451428 (-)
LOC110529423 LOC106571212 coding downstream 193268 13320455 ~ 13331260 (-)
LOC110529421 NA coding downstream 359831 13159465 ~ 13164697 (-)
enpp1 LOC100380852 coding downstream 524624 12951277 ~ 12999904 (-)
hsp90ab1 hsp90ab1 coding upstream 25659 13552248 ~ 13558751 (-)
LOC110529434 LOC106571223 coding upstream 71787 13598376 ~ 13601561 (-)
LOC110529435 LOC106571224 coding upstream 100172 13626761 ~ 13632856 (-)
LOC110529441 LOC106571256 coding upstream 813911 14340500 ~ 14392658 (-)
LOC110529444 LOC106571255 coding upstream 869422 14396011 ~ 14471129 (-)
G675377 NA non-coding downstream 4755 13518657 ~ 13519773 (-)
G675369 nfkbie non-coding downstream 7134 13516639 ~ 13517394 (-)
G675422 NA non-coding downstream 12760 13510945 ~ 13511768 (-)
G675417 NA non-coding downstream 35149 13487926 ~ 13489379 (-)
G675426 NA non-coding upstream 2949 13529538 ~ 13530033 (-)
G675427 NA non-coding upstream 4496 13531085 ~ 13531462 (-)
G675428 NA non-coding upstream 4961 13531550 ~ 13531926 (-)
G675430 NA non-coding upstream 7877 13534466 ~ 13534800 (-)
G675431 slc35b2 non-coding upstream 8584 13535173 ~ 13537755 (-)
G675415 NA other downstream 38391 13485679 ~ 13486137 (-)
G675413 NA other downstream 39594 13484093 ~ 13484934 (-)
lpgat1 lpgat1 other downstream 827205 12615879 ~ 12697323 (-)
G674015 NA other downstream 1240308 12283837 ~ 12284220 (-)
G675834 LOC106571238 other upstream 457037 13983626 ~ 13986108 (-)
G676077 NA other upstream 680398 14206987 ~ 14207625 (-)
G676178 NA other upstream 761260 14287849 ~ 14288345 (-)
G676635 LOC106571254 other upstream 985001 14508329 ~ 14516528 (-)
G679087 NA other upstream 2906032 16432621 ~ 16433014 (-)

Expression


Co-expression Network